SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0028275
Gene Symbol: BRAP
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.111659270G>A COSM1298918 TCGA-G2-A2ES-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p gcactttGAGGAAac CUUCCUCG m6b Disrupted HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-3609 gCACTTTGaggaaac CAAAGUGA m7a Disrupted HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-372-5p gcacTTTGAGGaaac CCUCAAAU m7a Disrupted HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-3973 gcACTTTGaggaaac ACAAAGUA m6b Disrupted HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-4796-3p gCACTTTAaggaaac UAAAGUGG m7a Created HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-670-3p gcacttTGAGGAAAc UUUCCUCA m8a Disrupted HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-93-5p GCACTTTGaggaaac CAAAGUGC m8a Disrupted HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-1238-3p gcactttGAGGAAac CUUCCUCG m6b Disrupted HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-3609 gCACTTTGaggaaac CAAAGUGA m7a Disrupted HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-372-5p gcacTTTGAGGaaac CCUCAAAU m7a Disrupted HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-3973 gcACTTTGaggaaac ACAAAGUA m6b Disrupted HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-4796-3p gCACTTTAaggaaac UAAAGUGG m7a Created HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-670-3p gcacttTGAGGAAAc UUUCCUCA m8a Disrupted HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-93-5p GCACTTTGaggaaac CAAAGUGC m8a Disrupted HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-1238-3p gcactttGAGGAAac CUUCCUCG m6b Disrupted HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-3609 gCACTTTGaggaaac CAAAGUGA m7a Disrupted HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-372-5p gcacTTTGAGGaaac CCUCAAAU m7a Disrupted HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-3973 gcACTTTGaggaaac ACAAAGUA m6b Disrupted HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-4796-3p gCACTTTAaggaaac UAAAGUGG m7a Created HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-670-3p gcacttTGAGGAAAc UUUCCUCA m8a Disrupted HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-93-5p GCACTTTGaggaaac CAAAGUGC m8a Disrupted HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-1238-3p gcactttGAGGAAac CUUCCUCG m6b Disrupted HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-3609 gCACTTTGaggaaac CAAAGUGA m7a Disrupted HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-372-5p gcacTTTGAGGaaac CCUCAAAU m7a Disrupted HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-3973 gcACTTTGaggaaac ACAAAGUA m6b Disrupted HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-4796-3p gCACTTTAaggaaac UAAAGUGG m7a Created HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-670-3p gcacttTGAGGAAAc UUUCCUCA m8a Disrupted HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-93-5p GCACTTTGaggaaac CAAAGUGC m8a Disrupted HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501

Mutation Mutation ID Sample Name Cancer Type
chr12:g.111659264A>C COSM4787802 CHC1597T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4734 tgaggaaCCGCAGCa GCUGCGGG m7a Created HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-6070 tgaGGAACCGcagca CCGGUUCC m7b Created HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-670-3p TGAGGAAAcgcagca UUUCCUCA m8a Disrupted HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-6854-3p tgagGAAACGCAgca UGCGUUUC m8a Disrupted HHHNA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-4734 tgaggaaCCGCAGCa GCUGCGGG m7a Created HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-6070 tgaGGAACCGcagca CCGGUUCC m7b Created HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-670-3p TGAGGAAAcgcagca UUUCCUCA m8a Disrupted HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-6854-3p tgagGAAACGCAgca UGCGUUUC m8a Disrupted HHHNE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-4734 tgaggaaCCGCAGCa GCUGCGGG m7a Created HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-6070 tgaGGAACCGcagca CCGGUUCC m7b Created HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-670-3p TGAGGAAAcgcagca UUUCCUCA m8a Disrupted HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-6854-3p tgagGAAACGCAgca UGCGUUUC m8a Disrupted HHHSA_6084_BRAP|NM_006768|exon_CDS|-4.9201129414243|-0.851839827985973
hsa-miR-4734 tgaggaaCCGCAGCa GCUGCGGG m7a Created HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-6070 tgaGGAACCGcagca CCGGUUCC m7b Created HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-670-3p TGAGGAAAcgcagca UUUCCUCA m8a Disrupted HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501
hsa-miR-6854-3p tgagGAAACGCAgca UGCGUUUC m8a Disrupted HHHSE_2036_BRAP|NM_006768|exon_CDS|-5.87852145891561|1.31480553720501

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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