SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0028273
Gene Symbol: BRAP
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.111655592C>T COSM167825 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6716-3p gatAGTTCGGAtaga UCCGAACU m8a Disrupted HHFKP_33403_cluster-5771_4_272

Mutation Mutation ID Sample Name Cancer Type
chr12:g.111655581G>T COSM1947735 SNU-C2B [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-592 tagagaaTGACACAg UUGUGUCA m7b Created HHFKP_33403_cluster-5771_4_272
hsa-miR-616-3p tagagAATGACacag AGUCAUUG m6b Created HHFKP_33403_cluster-5771_4_272
hsa-miR-6868-3p tagAGAAGGAcacag UUCCUUCU m7b Disrupted HHFKP_33403_cluster-5771_4_272
hsa-miR-942-5p tAGAGAAGgacacag UCUUCUCU m7b Disrupted HHFKP_33403_cluster-5771_4_272
hsa-miR-1248 tagAGAAGGacacag ACCUUCUU m6b Disrupted HHFKP_33403_cluster-5771_4_272

Mutation Mutation ID Sample Name Cancer Type
chr12:g.111655564T>C COSM1184862 587336 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-5p gaGGAAGCaagtctg AGCUUCCA m6b Created HHFKP_33403_cluster-5771_4_272
hsa-miR-3682-5p gagGAAGTAagtctg CUACUUCU m6b Disrupted HHFKP_33403_cluster-5771_4_272
hsa-miR-3977 gagGAAGCAagtctg GUGCUUCA m6b Created HHFKP_33403_cluster-5771_4_272
hsa-miR-516a-3p gAGGAAGCAagtctg UGCUUCCU m8a (m7a->m8a) HHFKP_33403_cluster-5771_4_272
hsa-miR-516b-3p gAGGAAGCAagtctg UGCUUCCU m8a (m7a->m8a) HHFKP_33403_cluster-5771_4_272
hsa-miR-7162-5p gAGGAAGCAagtctg UGCUUCCU m8a (m7a->m8a) HHFKP_33403_cluster-5771_4_272

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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