SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	hsa_circ_0082770
Gene Symbol:	BRAF
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Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr7:g.140834775G>T		COSM599331	TCGA-44-3918-01	[lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-8067	gTTTCTAGctctgca	CCUAGAAA	m7b	Disrupted	HHFCT_144915_uc003vwc.2_9_8
hsa-miR-3919	gtttctaTCTCTGCa	GCAGAGAA	m7a	Created	HHFCT_144915_uc003vwc.2_9_8
hsa-miR-4756-3p	gtttctATCTCTGca	CCAGAGAU	m7b	Created	HHFCT_144915_uc003vwc.2_9_8
hsa-miR-6508-5p	gTTTCTAGctctgca	UCUAGAAA	m7b	Disrupted	HHFCT_144915_uc003vwc.2_9_8

Mutation		Mutation ID	Sample Name	Cancer Type
chr7:g.140834757C>G		COSM2861463	HT29	[lung][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation		Mutation ID	Sample Name	Cancer Type
chr7:g.140834659C>T		COSM1729537	041T	[liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-3164	cAAGTCACcacaaaa	UGUGACUU	m7b	Disrupted	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-6820-3p	cAAGTCACcacaaaa	UGUGACUU	m7b	Disrupted	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-758-3p	caagtcaTCACAAAa	UUUGUGAC	m7a	Created	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-8070	caagtcATCACAaaa	AUGUGAUU	m6b	Created	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842

Mutation		Mutation ID	Sample Name	Cancer Type
chr7:g.140834654A>G		COSM3878769	TCGA-BR-A4QL-01	[stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-7114-5p	caCCACAGAaaccta	UCUGUGGA	m7a	(m6a->m7a)	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-134-3p	caCCACAGaaaccta	CCUGUGGG	m6b	Created	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-2113	cacCACAAAaaccta	AUUUGUGC	m6b	Disrupted	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-329-5p	caccacaAAAACCTa	GAGGUUUU	m7b	Disrupted	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-4652-3p	caccACAGAAaccta	GUUCUGUU	m6b	Created	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-5010-3p	cacCACAAAAaccta	UUUUGUGU	m7a	Disrupted	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842

Mutation		Mutation ID	Sample Name	Cancer Type
chr7:g.140834645C>T		COSM1167881	TCGA-G2-A2EL-01	[urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-338-5p	aaccTATTGTTagag	AACAAUAU	m7a	Created	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-6826-5p	aaCCTATTGttagag	UCAAUAGG	m7b	(m6b->m7b)	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842

Mutation		Mutation ID	Sample Name	Cancer Type
chr7:g.140834636C>G		COSM745344	TCGA-37-3783-01	[lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-4432	ttaGAGTCTTcctgc	AAAGACUC	m7b	Disrupted	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-7-5p	ttagaGTCTTCCtgc	UGGAAGAC	m7b	Disrupted	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842
hsa-miR-873-5p	ttagagtGTTCCTGc	GCAGGAAC	m7b	Created	HHKTA_41281_NM_004333|505|544|1.86052146522556|0.115988580333842

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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