SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_017637
Gene Symbol: BNC2
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr9:g.16527722A>C COSN15168411 LP6005690-DNA_F02 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr9:g.16422938A>G COSN6382994 RK199_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.16419128A>G COSM131401 HCC06T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-3p gtgCACTACAaaact UGUAGUGU m7a Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-148a-3p gTGCACTGcaaaact UCAGUGCA m7b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-148b-3p gTGCACTGcaaaact UCAGUGCA m7b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-152-3p gTGCACTGcaaaact UCAGUGCA m7b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-19a-5p gtgcactGCAAAACt AGUUUUGC m7b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-19b-1-5p gtgcactGCAAAACt AGUUUUGC m7b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-19b-2-5p gtgcactGCAAAACt AGUUUUGC m7b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-3674 gtgcaCTACAAaact AUUGUAGA m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-4671-3p gTGCACTAcaaaact UUAGUGCA m7b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-557 gtgcacTGCAAAact GUUUGCAC m6b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-6073 gtgCACTACaaaact GGUAGUGA m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-6499-3p gtgCACTGCaaaact AGCAGUGU m6b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-6516-5p gtgcACTGCAAAact UUUGCAGU m8a Created HHFKP_144145_cluster-23156_15_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.16419125A>C COSM292372 TCGA-AA-3558-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3674 caCTACAAaactgtg AUUGUAGA m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-4328 cactacAAAACTGtg CCAGUUUU m7b Disrupted HHFKP_144145_cluster-23156_15_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.16419110G>C COSM1314696 TCGA-BT-A2LA-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-215-3p cattTGACAGAaatg UCUGUCAU m7a Created HHFKP_144145_cluster-23156_15_8
hsa-miR-371a-5p caTTTGAGagaaatg ACUCAAAC m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-371b-5p caTTTGAGagaaatg ACUCAAAA m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-372-5p cATTTGAGagaaatg CCUCAAAU m7b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-373-5p caTTTGAGagaaatg ACUCAAAA m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-4652-3p catttgACAGAAatg GUUCUGUU m6b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-4743-3p catttGACAGAAAtg UUUCUGUC m8a Created HHFKP_144145_cluster-23156_15_8
hsa-miR-4768-5p catttGAGAGAAatg AUUCUCUC m7b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-616-5p caTTTGAGagaaatg ACUCAAAA m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-6773-3p cattTGACAGaaatg ACUGUCAC m6b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-6809-3p catttgAGAGAAatg CUUCUCUU m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-6833-3p catttGAGAGAAAtg UUUCUCUC m8a Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-6873-3p catttGAGAGAAatg UUCUCUCU m7a Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-6888-3p catttGACAGAaatg AUCUGUCU m6b Created HHFKP_144145_cluster-23156_15_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.16419110G>A COSM608208 TCGA-05-4398-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-371a-5p caTTTGAGagaaatg ACUCAAAC m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-371b-5p caTTTGAGagaaatg ACUCAAAA m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-372-5p cATTTGAGagaaatg CCUCAAAU m7b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-373-5p caTTTGAGagaaatg ACUCAAAA m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-4768-5p catttGAGAGAAatg AUUCUCUC m7b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-607 cATTTGAAagaaatg GUUCAAAU m7b Created HHFKP_144145_cluster-23156_15_8
hsa-miR-6809-3p catttgAGAGAAatg CUUCUCUU m6b Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-6833-3p catttGAGAGAAAtg UUUCUCUC m8a Disrupted HHFKP_144145_cluster-23156_15_8
hsa-miR-6873-3p catttGAGAGAAatg UUCUCUCU m7a Disrupted HHFKP_144145_cluster-23156_15_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.16419023T>A COSM4430806 409 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia_associated_with_MDS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1270 cctaATCTCCAcaaa CUGGAGAU m7b Disrupted HPCB1_41844_G53487.1_16419003
hsa-miR-4752 cctaatcTCCACAAa UUGUGGAU m7a Disrupted HPCB1_41844_G53487.1_16419003
hsa-miR-620 cctaATCTCCAcaaa AUGGAGAU m7b Disrupted HPCB1_41844_G53487.1_16419003
hsa-miR-6833-5p cctaatcTCCACAaa GUGUGGAA m6b Disrupted HPCB1_41844_G53487.1_16419003
hsa-miR-7847-3p cctaatCTCCACaaa CGUGGAGG m6b Disrupted HPCB1_41844_G53487.1_16419003

Mutation Mutation ID Sample Name Cancer Type
chr9:g.16419002C>T COSM1461565 TCGA-DM-A1D7-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203a-3p cccttCATTTCAgta GUGAAAUG m7b Created HPCB1_41844_G53487.1_16419003
hsa-miR-3616-5p cccttCACTTCAgta AUGAAGUG m7b Disrupted HPCB1_41844_G53487.1_16419003
hsa-miR-3646 cccTTCATTTcagta AAAAUGAA m7b Created HPCB1_41844_G53487.1_16419003
hsa-miR-4795-5p cccttCACTTCagta AGAAGUGG m6b Disrupted HPCB1_41844_G53487.1_16419003
hsa-miR-573 cccttCACTTCAGta CUGAAGUG m8a Disrupted HPCB1_41844_G53487.1_16419003

Mutation Mutation ID Sample Name Cancer Type
chr9:g.16419001T>C COSM4163669 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3616-5p ccttCACTTCAgtag AUGAAGUG m7b Disrupted HPCB1_41844_G53487.1_16419003
hsa-miR-4724-5p ccttcacTTCAGTag AACUGAAC m6b Disrupted HPCB1_41844_G53487.1_16419003
hsa-miR-4795-5p ccttCACTTCagtag AGAAGUGG m6b Disrupted HPCB1_41844_G53487.1_16419003
hsa-miR-573 ccttCACTTCAGtag CUGAAGUG m8a Disrupted HPCB1_41844_G53487.1_16419003
hsa-miR-7162-3p ccttcACCTCAGtag UCUGAGGU m7b Created HPCB1_41844_G53487.1_16419003
hsa-miR-7854-3p cctTCACCTCAgtag UGAGGUGA m8a Created HPCB1_41844_G53487.1_16419003
Mutation Mutation ID Sample Name Cancer Type
chr9:g.16418656C>G COSN7560572 8066852 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.16418352A>G COSN2313927 RK115_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6715a-3p aaaagaTGGTTTGct CCAAACCA m7b Created HHFKP_144140_cluster-23156_9_28
Mutation Mutation ID Sample Name Cancer Type
chr9:g.16418093A>C COSN9703982 AOCS-166-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.16417796G>C COSN8332195 SS6003320 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1228-3p gtGGTGTGAaacagc UCACACCU m7a (m7a->m6a) HPCB1_41832_G53476.2_16417801
hsa-miR-377-3p gtgGTGTGAaacagc AUCACACA m6b Disrupted HPCB1_41832_G53476.2_16417801
hsa-miR-5096 gtggtGTGAAACagc GUUUCACC m7a Disrupted HPCB1_41832_G53476.2_16417801
hsa-miR-514a-3p gtgGTGTCAAacagc AUUGACAC m7b Created HPCB1_41832_G53476.2_16417801
hsa-miR-514b-3p gtgGTGTCAAacagc AUUGACAC m7b Created HPCB1_41832_G53476.2_16417801

Mutation Mutation ID Sample Name Cancer Type
chr9:g.16417331C>AC COSN2313925 RK056_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-329-5p ctccAAAACCTttttt GAGGUUUU m7b Created HPCB1_41828_G53473.1_16417322
hsa-miR-4464 ctcCAAACCTTtttt AAGGUUUG m8a Disrupted HPCB1_41828_G53473.1_16417322
hsa-miR-4748 ctcCAAACCTttttt GAGGUUUG m7b Disrupted HPCB1_41828_G53473.1_16417322

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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