SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0018241
Gene Symbol: BMS1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.42797503G>A COSM188439 TCGA-AA-3984-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-208a-5p aacctccAAAAGCTt GAGCUUUU m7b Created HHFCT_20820_cluster-2407_4_8
hsa-miR-208b-5p aacctccAAAAGCTt AAGCUUUU m7b Created HHFCT_20820_cluster-2407_4_8
hsa-miR-3140-3p aacctcCAAAAGCTt AGCUUUUG m8a Created HHFCT_20820_cluster-2407_4_8
hsa-miR-4443 aaCCTCCAAaagctt UUGGAGGC m7a (m6a->m7a) HHFCT_20820_cluster-2407_4_8
hsa-miR-6515-5p aaCCTCCAAaagctt UUGGAGGG m7a (m6a->m7a) HHFCT_20820_cluster-2407_4_8
hsa-miR-7850-5p aaccTCCAAAagctt GUUUGGAC m6b Created HHFCT_20820_cluster-2407_4_8
Mutation Mutation ID Sample Name Cancer Type
chr10:g.42797502C>G COSM4771126 NYU695 [pleura][NS][mesothelioma][biphasic]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr10:g.42797483G>A COSM918092 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4327 ggcagcaGCAAGCag GGCUUGCA m6b Disrupted HHFCT_20820_cluster-2407_4_8
hsa-miR-744-3p ggcaGCAACAagcag CUGUUGCC m6b Created HHFCT_20820_cluster-2407_4_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42797015G>A COSM1297242 TCGA-DK-A1AD-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1245b-3p tgCATCTGAagatga UCAGAUGA m7a (m7a->m6a) HHFKP_19739_cluster-2407_4_17
hsa-miR-141-5p tgcatctGAAGATGa CAUCUUCC m7a Disrupted HHFKP_19739_cluster-2407_4_17
hsa-miR-3942-3p tgcATCTGAAgatga UUUCAGAU m7b Disrupted HHFKP_19739_cluster-2407_4_17
hsa-miR-8061 tgcATCTAAagatga CUUAGAUU m6b Created HHFKP_19739_cluster-2407_4_17

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42796997G>A COSM1702263 YUCHIME [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p caCAGCTGAagaggt UCAGCUGG m7a (m7a->m6a) HHFKP_19739_cluster-2407_4_17
hsa-miR-6515-3p cacagcTGAAGAGgt UCUCUUCA m7b Disrupted HHFKP_19739_cluster-2407_4_17
hsa-miR-877-3p cacagctGAAGAGGt UCCUCUUC m7b Disrupted HHFKP_19739_cluster-2407_4_17

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42796984G>T COSM1957090 LS411 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-365a-3p attctGGGCATTgca UAAUGCCC m7b Disrupted HHFKP_19739_cluster-2407_4_17
hsa-miR-365b-3p attctGGGCATTgca UAAUGCCC m7b Disrupted HHFKP_19739_cluster-2407_4_17

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42796975C>T COSM918089 TCGA-AX-A05Z-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548az-5p cCACTTTTGattctg CAAAAGUG m8a (m7a->m8a) HHFKP_19739_cluster-2407_4_17
hsa-miR-548n ccACTTTTGattctg CAAAAGUA m7a (m6a->m7a) HHFKP_19739_cluster-2407_4_17
hsa-miR-548t-5p cCACTTTTGattctg CAAAAGUG m8a (m7a->m8a) HHFKP_19739_cluster-2407_4_17

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42796961G>T COSM538689 TCGA-38-4632-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-185-5p gaaagcaTCTCTCCc UGGAGAGA m7b Created HHFKP_19739_cluster-2407_4_17
hsa-miR-4306 gaaagcaTCTCTCCc UGGAGAGA m7b Created HHFKP_19739_cluster-2407_4_17
hsa-miR-4644 gaaagcaTCTCTCCc UGGAGAGA m7b Created HHFKP_19739_cluster-2407_4_17
hsa-miR-4708-5p gaaaGCATCTCTccc AGAGAUGC m8a Created HHFKP_19739_cluster-2407_4_17
hsa-miR-558 gaaaGCAGCTCtccc UGAGCUGC m7b Disrupted HHFKP_19739_cluster-2407_4_17

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42796504G>A COSM4524232 CSCC-44-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1264 aacaaatAGACTTGa CAAGUCUU m7a Created HPCB1_4934_G6047.1_43291943
hsa-miR-138-2-3p aacAAATAGacttga GCUAUUUC m6b Created HPCB1_4934_G6047.1_43291943
hsa-miR-1264 aacaaatAGACTTGa CAAGUCUU m7a Created HPKTA_7662_G8180.1_43291945
hsa-miR-138-2-3p aacAAATAGacttga GCUAUUUC m6b Created HPKTA_7662_G8180.1_43291945
hsa-miR-1264 aacaaatAGACTTGa CAAGUCUU m7a Created HPRO6_10317_G11901.1_43291944
hsa-miR-138-2-3p aacAAATAGacttga GCUAUUUC m6b Created HPRO6_10317_G11901.1_43291944
hsa-miR-1264 aacaaatAGACTTGa CAAGUCUU m7a Created HPSD1_1134_G1482.1_43291943
hsa-miR-138-2-3p aacAAATAGacttga GCUAUUUC m6b Created HPSD1_1134_G1482.1_43291943
hsa-miR-1264 aacaaatAGACTTGa CAAGUCUU m7a Created HPTK1_4073_G4745.1_43291945
hsa-miR-138-2-3p aacAAATAGacttga GCUAUUUC m6b Created HPTK1_4073_G4745.1_43291945

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42796493G>T COSM4524044 CSCC-54-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p aaagGAGGAAaaaca CUUCCUCG m6b Disrupted HPCB1_4934_G6047.1_43291943
hsa-miR-2681-5p aaaggaGTAAAAaca GUUUUACC m6b Created HPCB1_4934_G6047.1_43291943
hsa-miR-4691-5p aaaGGAGGAaaaaca GUCCUCCA m6b Disrupted HPCB1_4934_G6047.1_43291943
hsa-miR-5193 aaAGGAGGAaaaaca UCCUCCUC m7a (m7a->m6a) HPCB1_4934_G6047.1_43291943
hsa-miR-660-3p aaAGGAGGaaaaaca ACCUCCUG m6b Disrupted HPCB1_4934_G6047.1_43291943
hsa-miR-670-3p aaagGAGGAAAaaca UUUCCUCA m7a Disrupted HPCB1_4934_G6047.1_43291943
hsa-miR-6749-3p aaaGGAGGAaaaaca CUCCUCCC m6b Disrupted HPCB1_4934_G6047.1_43291943
hsa-miR-6792-3p aaaGGAGGAaaaaca CUCCUCCA m6b Disrupted HPCB1_4934_G6047.1_43291943
hsa-miR-1238-3p aaagGAGGAAaaaca CUUCCUCG m6b Disrupted HPKTA_7662_G8180.1_43291945
hsa-miR-2681-5p aaaggaGTAAAAaca GUUUUACC m6b Created HPKTA_7662_G8180.1_43291945
hsa-miR-4691-5p aaaGGAGGAaaaaca GUCCUCCA m6b Disrupted HPKTA_7662_G8180.1_43291945
hsa-miR-5193 aaAGGAGGAaaaaca UCCUCCUC m7a (m7a->m6a) HPKTA_7662_G8180.1_43291945
hsa-miR-660-3p aaAGGAGGaaaaaca ACCUCCUG m6b Disrupted HPKTA_7662_G8180.1_43291945
hsa-miR-670-3p aaagGAGGAAAaaca UUUCCUCA m7a Disrupted HPKTA_7662_G8180.1_43291945
hsa-miR-6749-3p aaaGGAGGAaaaaca CUCCUCCC m6b Disrupted HPKTA_7662_G8180.1_43291945
hsa-miR-6792-3p aaaGGAGGAaaaaca CUCCUCCA m6b Disrupted HPKTA_7662_G8180.1_43291945
hsa-miR-1238-3p aaagGAGGAAaaaca CUUCCUCG m6b Disrupted HPRO6_10317_G11901.1_43291944
hsa-miR-2681-5p aaaggaGTAAAAaca GUUUUACC m6b Created HPRO6_10317_G11901.1_43291944
hsa-miR-4691-5p aaaGGAGGAaaaaca GUCCUCCA m6b Disrupted HPRO6_10317_G11901.1_43291944
hsa-miR-5193 aaAGGAGGAaaaaca UCCUCCUC m7a (m7a->m6a) HPRO6_10317_G11901.1_43291944
hsa-miR-660-3p aaAGGAGGaaaaaca ACCUCCUG m6b Disrupted HPRO6_10317_G11901.1_43291944
hsa-miR-670-3p aaagGAGGAAAaaca UUUCCUCA m7a Disrupted HPRO6_10317_G11901.1_43291944
hsa-miR-6749-3p aaaGGAGGAaaaaca CUCCUCCC m6b Disrupted HPRO6_10317_G11901.1_43291944
hsa-miR-6792-3p aaaGGAGGAaaaaca CUCCUCCA m6b Disrupted HPRO6_10317_G11901.1_43291944
hsa-miR-1238-3p aaagGAGGAAaaaca CUUCCUCG m6b Disrupted HPSD1_1134_G1482.1_43291943
hsa-miR-2681-5p aaaggaGTAAAAaca GUUUUACC m6b Created HPSD1_1134_G1482.1_43291943
hsa-miR-4691-5p aaaGGAGGAaaaaca GUCCUCCA m6b Disrupted HPSD1_1134_G1482.1_43291943
hsa-miR-5193 aaAGGAGGAaaaaca UCCUCCUC m7a (m7a->m6a) HPSD1_1134_G1482.1_43291943
hsa-miR-660-3p aaAGGAGGaaaaaca ACCUCCUG m6b Disrupted HPSD1_1134_G1482.1_43291943
hsa-miR-670-3p aaagGAGGAAAaaca UUUCCUCA m7a Disrupted HPSD1_1134_G1482.1_43291943
hsa-miR-6749-3p aaaGGAGGAaaaaca CUCCUCCC m6b Disrupted HPSD1_1134_G1482.1_43291943
hsa-miR-6792-3p aaaGGAGGAaaaaca CUCCUCCA m6b Disrupted HPSD1_1134_G1482.1_43291943
hsa-miR-1238-3p aaagGAGGAAaaaca CUUCCUCG m6b Disrupted HPTK1_4073_G4745.1_43291945
hsa-miR-2681-5p aaaggaGTAAAAaca GUUUUACC m6b Created HPTK1_4073_G4745.1_43291945
hsa-miR-4691-5p aaaGGAGGAaaaaca GUCCUCCA m6b Disrupted HPTK1_4073_G4745.1_43291945
hsa-miR-5193 aaAGGAGGAaaaaca UCCUCCUC m7a (m7a->m6a) HPTK1_4073_G4745.1_43291945
hsa-miR-660-3p aaAGGAGGaaaaaca ACCUCCUG m6b Disrupted HPTK1_4073_G4745.1_43291945
hsa-miR-670-3p aaagGAGGAAAaaca UUUCCUCA m7a Disrupted HPTK1_4073_G4745.1_43291945
hsa-miR-6749-3p aaaGGAGGAaaaaca CUCCUCCC m6b Disrupted HPTK1_4073_G4745.1_43291945
hsa-miR-6792-3p aaaGGAGGAaaaaca CUCCUCCA m6b Disrupted HPTK1_4073_G4745.1_43291945

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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