SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0018239
Gene Symbol: BMS1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.42830297C>T COSM918103 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-2-3p ttcaCTGTACAttcc CUGUACAG m7b Created HPCB1_4935_G6048.1_43325737
hsa-let-7g-3p ttcaCTGTACAttcc CUGUACAG m7b Created HPCB1_4935_G6048.1_43325737
hsa-miR-143-5p ttcACTGCACattcc GGUGCAGU m7b Disrupted HPCB1_4935_G6048.1_43325737
hsa-miR-6499-3p ttCACTGCacattcc AGCAGUGU m6b Disrupted HPCB1_4935_G6048.1_43325737

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42830290T>G COSM175687 TCGA-AG-A026-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p atttTAATTCACtgc GUGAAUUA m8a Disrupted HPCB1_4935_G6048.1_43325737
hsa-miR-3164 attttAAGTCACtgc UGUGACUU m7b Created HPCB1_4935_G6048.1_43325737
hsa-miR-5190 attttaaGTCACTGc CCAGUGAC m7b Created HPCB1_4935_G6048.1_43325737
hsa-miR-6820-3p attttAAGTCACtgc UGUGACUU m7b Created HPCB1_4935_G6048.1_43325737

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42823772C>A COSM918102 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-145-3p acaAGGAATCtctgt GGAUUCCU m7b Created HHFKP_19745_cluster-2407_10_8
hsa-miR-4756-3p acaaggaATCTCTGt CCAGAGAU m7b Created HHFKP_19745_cluster-2407_10_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42823170G>A COSM138752 GC8_T [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15b-3p gTGATTCGaacagtc CGAAUCAU m7a Disrupted HHFCT_20826_cluster-2407_10_8
hsa-miR-452-5p gtgattcAAACAGTc AACUGUUU m7b Created HHFCT_20826_cluster-2407_10_8
hsa-miR-4676-3p gtgattcAAACAGTc CACUGUUU m7b Created HHFCT_20826_cluster-2407_10_8
hsa-miR-892c-3p gtgattcAAACAGTc CACUGUUU m7b Created HHFCT_20826_cluster-2407_10_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42823169C>T COSM259654 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15b-3p tgTGATTCGaacagt CGAAUCAU m7a (m7a->m6a) HHFCT_20826_cluster-2407_10_8
hsa-miR-3671 tgtgATTTGAacagt AUCAAAUA m6b Created HHFCT_20826_cluster-2407_10_8
hsa-miR-4762-5p tgtGATTTGaacagt CCAAAUCU m6b Created HHFCT_20826_cluster-2407_10_8
hsa-miR-607 tgtgATTTGAACagt GUUCAAAU m8a Created HHFCT_20826_cluster-2407_10_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42823158G>A COSM230192 ME049T [NS][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3065-3p tttgaaGGTGCTGtg UCAGCACC m7b Disrupted HHFCT_20826_cluster-2407_10_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42823154G>A COSM4977311 1N57-VS-1T57 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3671 caaATTTGAaggtgc AUCAAAUA m6b Disrupted HHFCT_20826_cluster-2407_10_8
hsa-miR-513a-3p cAAATTTAaaggtgc UAAAUUUC m7a Created HHFCT_20826_cluster-2407_10_8
hsa-miR-513c-3p cAAATTTAaaggtgc UAAAUUUC m7a Created HHFCT_20826_cluster-2407_10_8
hsa-miR-607 caaATTTGAAggtgc GUUCAAAU m7b Disrupted HHFCT_20826_cluster-2407_10_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42823149A>G COSM1505485 2_RESISTANT [NS][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3126-3p gtgGCCAGATttgaa CAUCUGGC m7b Created HHFCT_20826_cluster-2407_10_8
hsa-miR-3176 gtGGCCAGatttgaa ACUGGCCU m6b Created HHFCT_20826_cluster-2407_10_8
hsa-miR-3190-5p gTGGCCAGAtttgaa UCUGGCCA m8a (m7a->m8a) HHFCT_20826_cluster-2407_10_8
hsa-miR-4701-5p GTGGCCAAatttgaa UUGGCCAC m8a Disrupted HHFCT_20826_cluster-2407_10_8
hsa-miR-4762-5p gtggccAGATTTGaa CCAAAUCU m7b Created HHFCT_20826_cluster-2407_10_8
hsa-miR-588 GTGGCCAAatttgaa UUGGCCAC m8a Disrupted HHFCT_20826_cluster-2407_10_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42820615C>T COSM4014140 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-16-2-3p attATATTGaagacc CCAAUAUU m6b Created HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-195-3p attATATTGaagacc CCAAUAUU m6b Created HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42820613A>T COSM1505486 TCGA-95-7039-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-374b-5p gTATTATATcgaaga AUAUAAUA m8a (m8a->m7a) HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-5692a gtATTATTTcgaaga CAAAUAAU m7b (m6b->m7b) HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42820585G>T COSM684328 TCGA-34-5231-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3145-5p ggTGGAGTaggtttc AACUCCAA m6b Created HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-4691-5p ggTGGAGGAggtttc GUCCUCCA m7b (m7b->m6b) HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-5193 ggtgGAGGAGGtttc UCCUCCUC m7b Disrupted HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-6792-3p ggTGGAGGAGgtttc CUCCUCCA m8a Disrupted HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42820585G>A COSM1347788 TCGA-AD-6965-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4691-5p ggTGGAGGAggtttc GUCCUCCA m7b (m7b->m6b) HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-5193 ggtgGAGGAGGtttc UCCUCCUC m7b Disrupted HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-6792-3p ggTGGAGGAGgtttc CUCCUCCA m8a Disrupted HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42820584G>T COSM918100 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4691-5p gggTGGAGGAggttt GUCCUCCA m7b Disrupted HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-5193 gggtgGAGGAGGttt UCCUCCUC m7b Disrupted HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-6072 gggtgGATGAGGttt UCCUCAUC m7b Created HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-6792-3p gggTGGAGGAGgttt CUCCUCCA m8a Disrupted HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-6870-3p gggtGGATGAGgttt GCUCAUCC m7b Created HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812
hsa-miR-6891-3p gggtgGATGAGGttt CCCUCAUC m7b Created HHKTA_25759_NM_014753|3197|3236|2.85568410941597|0.536607282945812

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42791746T>G COSM3437737 TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 aaaCTTCTCaccctt AGAGAAGA m6b Disrupted HPRO6_10316_G11900.1_43287200

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42791700G>A COSM4416006 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-3p ctgggCCATTTTatt AAAAUGGU m7a Created HPRO6_10315_G11899.1_43287143
hsa-miR-3163 ctgggccATTTTATt UAUAAAAU m7b Created HPRO6_10315_G11899.1_43287143
hsa-miR-3662 ctgggcCATTTTatt GAAAAUGA m6b Created HPRO6_10315_G11899.1_43287143
hsa-miR-424-3p ctgggcCGTTTTatt CAAAACGU m6b Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-4485-3p ctgGGCCGTTttatt UAACGGCC m7b Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-522-3p ctgggCCATTTTatt AAAAUGGU m7a Created HPRO6_10315_G11899.1_43287143
hsa-miR-548ad-3p ctgggcCGTTTTatt GAAAACGA m6b Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-553 ctgggCCGTTTTatt AAAACGGU m7a Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-6075 cTGGGCCGTtttatt ACGGCCCA m8a (m8a->m7a) HPRO6_10315_G11899.1_43287143

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42791685T>A COSM4572276 CSCC-49-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273g-5p caagaaAACCACaat GGUGGUUG m6b Created HPRO6_10315_G11899.1_43287143
hsa-miR-203a-5p caagaaAACCACaat AGUGGUUC m6b Created HPRO6_10315_G11899.1_43287143
hsa-miR-3167 caaGAAATCCacaat AGGAUUUC m7b Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-3691-5p caagaaATCCACaat AGUGGAUG m6b Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-376b-5p caagaaATCCACaat CGUGGAUA m6b Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-376c-5p caagaaATCCACaat GGUGGAUA m6b Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-4752 caagaaATCCACAAt UUGUGGAU m8a Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-6833-5p caagaaaTCCACAat GUGUGGAA m6b Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-8056 caagaAATCCACaat CGUGGAUU m7b Disrupted HPRO6_10315_G11899.1_43287143
hsa-miR-876-5p caaGAAATCCAcaat UGGAUUUC m8a Disrupted HPRO6_10315_G11899.1_43287143

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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