SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0018233
Gene Symbol: BMS1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.42785670C>G COSM1321365 TCGA-61-1733-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-342-3p attGTGTGAGgtagg UCUCACAC m7b Created HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-377-3p atTGTGTGAggtagg AUCACACA m7b (m6b->m7b) HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-4777-3p attgtgTGAGGTAgg AUACCUCA m7b Created HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-6730-3p attGTGTCAGGtagg CCUGACAC m8a Disrupted HHRBC_1609_BC3-2of3-SCL_11191

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42785644G>C COSM3790777 TCGA-GV-A40E-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-5p tgacTGAGATCagag GAUCUCAC m7a Disrupted HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-219b-5p tgactGACATCagag AGAUGUCC m6b Created HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-3151-3p tgactgaGATCAGag CCUGAUCC m6b Disrupted HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-3192-3p tgactgaGATCAGAg CUCUGAUC m7b Disrupted HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-4264 tGACTGAGatcagag ACUCAGUC m7b Disrupted HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-4502 tgactgaCATCAGag GCUGAUGA m6b Created HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-4695-3p tgacTGAGATCAgag UGAUCUCA m8a Disrupted HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-7641 tgactGAGATCAgag UUGAUCUC m7b Disrupted HHRBC_1609_BC3-2of3-SCL_11191

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42785641T>G COSM4416318 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-5p agttgacTGAGATCa GAUCUCAC m7a Disrupted HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-3605-3p agttgACGGAGatca CCUCCGUG m6b Created HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-4264 agttGACTGAGatca ACUCAGUC m7b Disrupted HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-4695-3p agttgacTGAGATCa UGAUCUCA m7b Disrupted HHRBC_1609_BC3-2of3-SCL_11191

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42785641T>C COSM3931014 B80-8-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-5p agttgacTGAGATCa GAUCUCAC m7a Disrupted HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-4264 agttGACTGAGatca ACUCAGUC m7b Disrupted HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-4695-3p agttgacTGAGATCa UGAUCUCA m7b Disrupted HHRBC_1609_BC3-2of3-SCL_11191
hsa-miR-8088 agttgACCGAGatca CCUCGGUA m6b Created HHRBC_1609_BC3-2of3-SCL_11191

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42785583T>C COSM4570493 CSCC-41-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-208a-5p ccAAAAGCTggaaag GAGCUUUU m7b (m6b->m7b) HHFCT_20818_cluster-2407_2_22
hsa-miR-208b-5p ccAAAAGCTggaaag AAGCUUUU m7b (m6b->m7b) HHFCT_20818_cluster-2407_2_22
hsa-miR-3140-3p cCAAAAGCTggaaag AGCUUUUG m8a (m7a->m8a) HHFCT_20818_cluster-2407_2_22
hsa-miR-3180-5p ccaaaagCTGGAAag CUUCCAGA m6b Created HHFCT_20818_cluster-2407_2_22
hsa-miR-4267 ccaaaAGCTGGAaag UCCAGCUC m7a Created HHFCT_20818_cluster-2407_2_22
hsa-miR-6512-3p ccaaaaGCTGGAAag UUCCAGCC m7a Created HHFCT_20818_cluster-2407_2_22
hsa-miR-6720-5p ccaaaaGCTGGAAag UUCCAGCC m7a Created HHFCT_20818_cluster-2407_2_22
hsa-miR-208a-5p ccAAAAGCTggaaag GAGCUUUU m7b (m6b->m7b) HHFKP_19737_cluster-2407_2_8
hsa-miR-208b-5p ccAAAAGCTggaaag AAGCUUUU m7b (m6b->m7b) HHFKP_19737_cluster-2407_2_8
hsa-miR-3140-3p cCAAAAGCTggaaag AGCUUUUG m8a (m7a->m8a) HHFKP_19737_cluster-2407_2_8
hsa-miR-3180-5p ccaaaagCTGGAAag CUUCCAGA m6b Created HHFKP_19737_cluster-2407_2_8
hsa-miR-4267 ccaaaAGCTGGAaag UCCAGCUC m7a Created HHFKP_19737_cluster-2407_2_8
hsa-miR-6512-3p ccaaaaGCTGGAAag UUCCAGCC m7a Created HHFKP_19737_cluster-2407_2_8
hsa-miR-6720-5p ccaaaaGCTGGAAag UUCCAGCC m7a Created HHFKP_19737_cluster-2407_2_8
Mutation Mutation ID Sample Name Cancer Type
chr10:g.42785552A>G COSM1289360 CLL103 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr10:g.42784549G>A COSM1957034 BHY [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3130-3p gctGTGCAGatggct GCUGCACC m6b Created HHFCT_20817_cluster-2407_1_10

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42784543C>T COSM3867199 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4771 cAGTCTGCTgtgcgg AGCAGACU m8a (m8a->m7a) HHFCT_20817_cluster-2407_1_10
hsa-miR-5003-5p cagtcTGTTGTGcgg UCACAACA m7b Created HHFCT_20817_cluster-2407_1_10
hsa-miR-922 cagTCTGCTGtgcgg GCAGCAGA m7b Disrupted HHFCT_20817_cluster-2407_1_10

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42784525CT>C COSM4665883 T3262 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-518a-5p cccaaagCTTTGCAG CUGCAAAG m8a Created HHFCT_20817_cluster-2407_1_10
hsa-miR-527 cccaaagCTTTGCAG CUGCAAAG m8a Created HHFCT_20817_cluster-2407_1_10
hsa-miR-548aj-5p cccaaagCTTTTGCAg UGCAAAAG m8a Disrupted HHFCT_20817_cluster-2407_1_10
hsa-miR-548f-5p cccaaagCTTTTGCAg UGCAAAAG m8a Disrupted HHFCT_20817_cluster-2407_1_10
hsa-miR-548g-5p cccaaagCTTTTGCAg UGCAAAAG m8a Disrupted HHFCT_20817_cluster-2407_1_10
hsa-miR-548x-5p cccaaagCTTTTGCAg UGCAAAAG m8a Disrupted HHFCT_20817_cluster-2407_1_10

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser