SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_014753
Gene Symbol: BMS1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.42831203A>C COSN6970583 8033510 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4524a-3p tcaagagCTGTCTCt UGAGACAG m7b Created HHFCT_20828_cluster-2407_12_8

Mutation Mutation ID Sample Name Cancer Type
chr10:g.42830939T>A COSM427543 TCGA-D8-A143-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548q cgGCACCAGCacaat GCUGGUGC m8a Created HPKTA_7665_G8183.1_43326395
hsa-miR-6131 cggcACCAGCacaat GGCUGGUC m6b Created HPKTA_7665_G8183.1_43326395
hsa-miR-657 cggcACCTGCacaat GGCAGGUU m6b Disrupted HPKTA_7665_G8183.1_43326395
hsa-miR-764 cgGCACCTGCacaat GCAGGUGC m8a Disrupted HPKTA_7665_G8183.1_43326395
hsa-miR-133a-5p cggcACCAGCacaat AGCUGGUA m6b Created HPKTA_7665_G8183.1_43326395
hsa-miR-138-5p cggCACCAGCacaat AGCUGGUG m7b Created HPKTA_7665_G8183.1_43326395
hsa-miR-143-5p cggcacCTGCACaat GGUGCAGU m6b Disrupted HPKTA_7665_G8183.1_43326395
hsa-miR-4299 cggCACCAGCacaat GCUGGUGA m7a Created HPKTA_7665_G8183.1_43326395
hsa-miR-3665 cggCACCTGCacaat AGCAGGUG m7b Disrupted HPKTA_7665_G8183.1_43326395
hsa-miR-3944-5p cggcacCTGCACAat UGUGCAGC m7a Disrupted HPKTA_7665_G8183.1_43326395

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser