SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_130850
Gene Symbol: BMP4
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.53954626G>C COSN1653988 RK061_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-139-5p aACTGTAGgtaggta UCUACAGU m7b Disrupted HHFCT_45023_cluster-6879_5_8

Mutation Mutation ID Sample Name Cancer Type
chr14:g.53950509G>T COSM956289 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-328-3p AGGGCCAGcatgtca CUGGCCCU m8a Disrupted HHFCT_45021_cluster-6879_3_20

Mutation Mutation ID Sample Name Cancer Type
chr14:g.53950505G>A COSM956288 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-378a-5p ccagcatGTCAGGAt CUCCUGAC m7b Disrupted HHFCT_45021_cluster-6879_3_20
hsa-miR-6719-3p ccagcATGTCAGgat UCUGACAU m7b Disrupted HHFCT_45021_cluster-6879_3_20
hsa-miR-6730-3p ccagcaTGTCAGGat CCUGACAC m7a Disrupted HHFCT_45021_cluster-6879_3_20
Mutation Mutation ID Sample Name Cancer Type
chr14:g.53950492G>A COSM956287 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr14:g.53950488G>A COSM2245052 3N05-VS-3T05 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr14:g.53950484C>T COSM4508424 CSCC-5-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HHFCT_45021_cluster-6879_3_20
hsa-let-7b-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HHFCT_45021_cluster-6879_3_20
hsa-let-7c-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HHFCT_45021_cluster-6879_3_20
hsa-let-7d-5p atcgtTACCTCaagg AGAGGUAG m6b Disrupted HHFCT_45021_cluster-6879_3_20
hsa-let-7e-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HHFCT_45021_cluster-6879_3_20
hsa-let-7f-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HHFCT_45021_cluster-6879_3_20
hsa-let-7g-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HHFCT_45021_cluster-6879_3_20
hsa-let-7i-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HHFCT_45021_cluster-6879_3_20
hsa-miR-202-3p atcgtTACCTCaagg AGAGGUAU m6b Disrupted HHFCT_45021_cluster-6879_3_20
hsa-miR-4458 atcgtTACCTCaagg AGAGGUAG m6b Disrupted HHFCT_45021_cluster-6879_3_20
hsa-miR-4500 atcgtTACCTCAagg UGAGGUAG m7a Disrupted HHFCT_45021_cluster-6879_3_20
hsa-miR-98-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HHFCT_45021_cluster-6879_3_20
hsa-let-7a-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HPKMA_4637_G5430.1_54417205
hsa-let-7b-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HPKMA_4637_G5430.1_54417205
hsa-let-7c-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HPKMA_4637_G5430.1_54417205
hsa-let-7d-5p atcgtTACCTCaagg AGAGGUAG m6b Disrupted HPKMA_4637_G5430.1_54417205
hsa-let-7e-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HPKMA_4637_G5430.1_54417205
hsa-let-7f-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HPKMA_4637_G5430.1_54417205
hsa-let-7g-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HPKMA_4637_G5430.1_54417205
hsa-let-7i-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HPKMA_4637_G5430.1_54417205
hsa-miR-202-3p atcgtTACCTCaagg AGAGGUAU m6b Disrupted HPKMA_4637_G5430.1_54417205
hsa-miR-4458 atcgtTACCTCaagg AGAGGUAG m6b Disrupted HPKMA_4637_G5430.1_54417205
hsa-miR-4500 atcgtTACCTCAagg UGAGGUAG m7a Disrupted HPKMA_4637_G5430.1_54417205
hsa-miR-98-5p atcgtTACCTCAagg UGAGGUAG m7a Disrupted HPKMA_4637_G5430.1_54417205

Mutation Mutation ID Sample Name Cancer Type
chr14:g.53949847A>G COSN6637747 CHC433T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-5p cttatttGTGACTTt CAAGUCAC m7b Created HHFCT_45020_cluster-6879_2_21
hsa-miR-4719 cttATTTGTGActtt UCACAAAU m8a Created HHFCT_45020_cluster-6879_2_21

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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