SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001003398
Gene Symbol: BICD1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.32377627G>T COSM1184699 587304 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 acccctaTTCTTCat AGAAGAAG m6b Created HHFCT_37058_cluster-4863_45_8
hsa-miR-6507-5p accccTATTCTTCat GAAGAAUA m8a Created HHFCT_37058_cluster-4863_45_8
hsa-miR-8087 acccctAGTCTTCat GAAGACUU m7a Disrupted HHFCT_37058_cluster-4863_45_8

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32377595C>T COSM238963 WA12 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3978 cgcccCTTTCCACtg GUGGAAAG m8a Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-423-5p cGCCCCTCtccactg UGAGGGGC m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-5192 cgcccCTCTCCactg AGGAGAGU m6b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-5681a cgcCCCTTTCcactg AGAAAGGG m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32377589G>A COSM166457 AML12 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia_therapy_related]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106b-3p cCAGTGCGcccctct CCGCACUG m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-1914-3p ccagtgcACCCCTCt GGAGGGGU m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-3184-5p ccagtgcGCCCCTCt UGAGGGGC m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-342-5p ccagtGCACCCCTct AGGGGUGC m8a Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-423-5p ccagtgcGCCCCTCt UGAGGGGC m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-4664-5p ccagtGCACCCCtct UGGGGUGC m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-5194 ccagtgcACCCCTCt UGAGGGGU m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6722-5p ccaGTGCGCCcctct AGGCGCAC m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6738-5p ccagtgcACCCCTCt CGAGGGGU m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6782-5p ccagtgCACCCCTct UAGGGGUG m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32377588C>T COSM185640 T2269 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106b-3p ccCAGTGCGcccctc CCGCACUG m7b (m7b->m6b) HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-4688 cccagtgTGCCCCTc UAGGGGCA m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6722-5p cccaGTGCGCCcctc AGGCGCAC m7b Disrupted HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6743-5p cccagtgTGCCCCTc AAGGGGCA m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-6757-3p cCCAGTGTgcccctc AACACUGG m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231
hsa-miR-8064 cccAGTGTGCccctc AGCACACU m7b Created HHKTA_47519_NM_001714|2944|2983|1.47110999575974|0.0987882370871231

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32339035C>T COSN15314159 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3175 agacTCTCCCCttcc CGGGGAGA m7b Disrupted HHFCT_37048_cluster-4863_35_11
hsa-miR-3179 agactctCCCCTTCc AGAAGGGG m7b Disrupted HHFCT_37048_cluster-4863_35_11
hsa-miR-5192 agACTCTCCccttcc AGGAGAGU m7b (m7b->m6b) HHFCT_37048_cluster-4863_35_11
hsa-miR-6077 agaCTCTTCCCttcc GGGAAGAG m8a Created HHFCT_37048_cluster-4863_35_11
hsa-miR-6731-5p agaCTCTCCCcttcc UGGGAGAG m7b Disrupted HHFCT_37048_cluster-4863_35_11
hsa-miR-7515 agactctTCCCTTCc AGAAGGGA m7b Created HHFCT_37048_cluster-4863_35_11
hsa-miR-8085 agaCTCTCCCcttcc UGGGAGAG m7b Disrupted HHFCT_37048_cluster-4863_35_11
hsa-miR-9500 agactCTTCCCTTcc AAGGGAAG m8a Created HHFCT_37048_cluster-4863_35_11

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32334643C>T COSM3460202 TCGA-EE-A29M-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255a ttCTCATCCctgaga AGGAUGAG m7b (m7b->m6b) HHFCT_37042_cluster-4863_29_8
hsa-miR-1255b-5p ttCTCATCCctgaga CGGAUGAG m7b (m7b->m6b) HHFCT_37042_cluster-4863_29_8
hsa-miR-1266-5p ttctcatCCCTGAGa CCUCAGGG m7b Disrupted HHFCT_37042_cluster-4863_29_8
hsa-miR-211-3p ttctcaTCCCTGaga GCAGGGAC m6b Disrupted HHFCT_37042_cluster-4863_29_8
hsa-miR-3664-3p ttctcatTCCTGAGa UCUCAGGA m7b Created HHFCT_37042_cluster-4863_29_8
hsa-miR-4441 ttctcaTCCCTGaga ACAGGGAG m6b Disrupted HHFCT_37042_cluster-4863_29_8
hsa-miR-4518 ttctcatCCCTGAGa GCUCAGGG m7b Disrupted HHFCT_37042_cluster-4863_29_8
hsa-miR-5187-5p ttcTCATCCCtgaga UGGGAUGA m7b Disrupted HHFCT_37042_cluster-4863_29_8
hsa-miR-6754-5p ttctcaTCCCTGaga CCAGGGAG m6b Disrupted HHFCT_37042_cluster-4863_29_8
hsa-miR-6757-5p ttctCATCCCTgaga UAGGGAUG m7b Disrupted HHFCT_37042_cluster-4863_29_8
hsa-miR-873-5p ttctcaTTCCTGaga GCAGGAAC m6b Created HHFCT_37042_cluster-4863_29_8

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32332815A>T COSN5833607 SS6003137 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-126-5p tagAATAATatattc CAUUAUUA m6b Disrupted HPKTA_13193_G14235.1_32485756
hsa-miR-1277-5p tagaataATATATTc AAAUAUAU m7b Disrupted HPKTA_13193_G14235.1_32485756
hsa-miR-369-3p tagaaTATTATattc AAUAAUAC m6b Created HPKTA_13193_G14235.1_32485756
hsa-miR-374a-5p tagaaTATTATAttc UUAUAAUA m7b Created HPKTA_13193_G14235.1_32485756
hsa-miR-374b-5p tagaaTATTATATtc AUAUAAUA m8a Created HPKTA_13193_G14235.1_32485756
hsa-miR-4795-3p tagAATAATATattc AUAUUAUU m8a Disrupted HPKTA_13193_G14235.1_32485756
hsa-miR-5692b tagaATATTATattc AAUAAUAU m7b Created HPKTA_13193_G14235.1_32485756
hsa-miR-5692c tagaATATTATattc AAUAAUAU m7b Created HPKTA_13193_G14235.1_32485756
hsa-miR-656-3p tagaATAATATattc AAUAUUAU m7b Disrupted HPKTA_13193_G14235.1_32485756

Mutation Mutation ID Sample Name Cancer Type
chr12:g.32143016C>T COSN7614281 PCSI_0164_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-5p ttttCTTTATagcac CAUAAAGU m6b Created HPHES_1755_G2328.1_32295953
hsa-miR-3185 ttTTCTTCatagcac AGAAGAAG m6b Disrupted HPHES_1755_G2328.1_32295953
hsa-miR-340-5p ttttCTTTATAgcac UUAUAAAG m7b Created HPHES_1755_G2328.1_32295953
hsa-miR-5590-3p ttttCTTTATagcac AAUAAAGU m6b Created HPHES_1755_G2328.1_32295953

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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