SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0075970
Gene Symbol: BAK1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.33574145A>G COSM1078090 TCGA-AP-A054-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1296-5p tGGCCCTAcacgtct UUAGGGCC m7b Disrupted HPSEF_20094_G24253.1_33541913
hsa-miR-135b-3p tggCCCTACAcgtct AUGUAGGG m7b Disrupted HPSEF_20094_G24253.1_33541913
hsa-miR-1909-3p tggCCCTGCacgtct CGCAGGGG m6b Created HPSEF_20094_G24253.1_33541913
hsa-miR-6132 tgGCCCTGCacgtct AGCAGGGC m7b (m6b->m7b) HPSEF_20094_G24253.1_33541913
hsa-miR-6836-5p tgGCCCTGCacgtct CGCAGGGC m7b (m6b->m7b) HPSEF_20094_G24253.1_33541913
hsa-miR-6895-5p TGGCCCTGcacgtct CAGGGCCA m8a Created HPSEF_20094_G24253.1_33541913

Mutation Mutation ID Sample Name Cancer Type
chr6:g.33574141G>A COSM3873221 TCGA-CG-4306-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3529-5p cctacacGTCTACCa AGGUAGAC m7b Disrupted HPSEF_20094_G24253.1_33541913
hsa-miR-376a-2-5p cctacacATCTACCa GGUAGAUU m7a Created HPSEF_20094_G24253.1_33541913
hsa-miR-379-5p cctacacGTCTACCa UGGUAGAC m7b Disrupted HPSEF_20094_G24253.1_33541913
hsa-miR-511-3p ccTACACATctacca AAUGUGUA m7b (m6b->m7b) HPSEF_20094_G24253.1_33541913
hsa-miR-576-3p cctaCACATCTacca AAGAUGUG m7b Created HPSEF_20094_G24253.1_33541913
hsa-miR-6863 cctaCACGTCTAcca UAGACGUG m8a Disrupted HPSEF_20094_G24253.1_33541913

Mutation Mutation ID Sample Name Cancer Type
chr6:g.33574135C>T COSM4772133 GC_296T1-GC_296N [stomach][NS][carcinoma][diffuse_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-133a-5p cgtcTACCAGCatgg AGCUGGUA m7b Disrupted HPSEF_20094_G24253.1_33541913
hsa-miR-138-5p cgtctACCAGCatgg AGCUGGUG m6b Disrupted HPSEF_20094_G24253.1_33541913
hsa-miR-3146 cgtctaCTAGCATGg CAUGCUAG m8a Created HPSEF_20094_G24253.1_33541913
hsa-miR-325 cgtCTACTAGcatgg CCUAGUAG m7b Created HPSEF_20094_G24253.1_33541913
hsa-miR-3529-5p cGTCTACCagcatgg AGGUAGAC m7b Disrupted HPSEF_20094_G24253.1_33541913
hsa-miR-379-5p cGTCTACCAgcatgg UGGUAGAC m8a (m8a->m7a) HPSEF_20094_G24253.1_33541913
hsa-miR-411-5p cGTCTACTAgcatgg UAGUAGAC m8a (m7a->m8a) HPSEF_20094_G24253.1_33541913
hsa-miR-449c-3p cgtctACTAGCAtgg UUGCUAGU m7b Created HPSEF_20094_G24253.1_33541913
hsa-miR-4650-3p cgTCTACCagcatgg AGGUAGAA m6b Disrupted HPSEF_20094_G24253.1_33541913
hsa-miR-6131 cgtctACCAGCatgg GGCUGGUC m6b Disrupted HPSEF_20094_G24253.1_33541913

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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