SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0067653
Gene Symbol: ATR
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr3:g.142568134A>G COSM1632869 RK194_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4742-3p gaatatAATACAGtt UCUGUAUU m7b Disrupted HHFCT_106811_cluster-16797_23_25
hsa-miR-625-3p gaaTATAGTacagtt GACUAUAG m6b Created HHFCT_106811_cluster-16797_23_25
hsa-miR-4742-3p gaatatAATACAGtt UCUGUAUU m7b Disrupted HHFKP_99227_cluster-16797_24_23
hsa-miR-625-3p gaaTATAGTacagtt GACUAUAG m6b Created HHFKP_99227_cluster-16797_24_23

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142568103G>A COSM1419644 TCGA-AA-3492-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376c-3p aaatTCTATGTcaat AACAUAGA m7b Created HHFCT_106811_cluster-16797_23_25
hsa-miR-489-3p aaattctATGTCAat GUGACAUC m6b Created HHFCT_106811_cluster-16797_23_25
hsa-miR-514a-3p aaattctGTGTCAAt AUUGACAC m7b Disrupted HHFCT_106811_cluster-16797_23_25
hsa-miR-514b-3p aaattctGTGTCAAt AUUGACAC m7b Disrupted HHFCT_106811_cluster-16797_23_25
hsa-miR-642a-3p aaattcTGTGTCaat AGACACAU m6b Disrupted HHFCT_106811_cluster-16797_23_25
hsa-miR-642b-3p aaattcTGTGTCaat AGACACAU m6b Disrupted HHFCT_106811_cluster-16797_23_25

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142566142G>T COSM279084 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4757-5p aagccatGAGGCCaa AGGCCUCU m6b Disrupted HHFCT_106810_cluster-16797_22_17
hsa-miR-5197-5p aaGCCATTaggccaa CAAUGGCA m6b Created HHFCT_106810_cluster-16797_22_17
hsa-miR-6744-3p aagccatGAGGCCaa GGGCCUCU m6b Disrupted HHFCT_106810_cluster-16797_22_17
hsa-miR-6878-3p aagccatGAGGCCAa CUGGCCUC m7b Disrupted HHFCT_106810_cluster-16797_22_17
hsa-miR-889-5p aAGCCATTaggccaa AAUGGCUG m7a Created HHFCT_106810_cluster-16797_22_17

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142566127T>A COSM4171207 11_FL [haematopoietic_and_lymphoid_tissue][abdomen][lymphoid_neoplasm][follicular_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8084 aggcagTAGTATTgg GAAUACUA m7b Created HHFCT_106810_cluster-16797_22_17

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142562770T>C COSM149487 71 [endometrium][NS][hyperplasia][complex]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-451a ttattAACGGTTctt AAACCGUU m7b Created HHFCT_106809_cluster-16797_21_33
hsa-miR-6512-5p ttatTAATGGTtctt UACCAUUA m7b Disrupted HHFCT_106809_cluster-16797_21_33

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142562769G>A COSM3408297 TCGA-12-3653-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4511 tattaatAGTTCTTa GAAGAACU m7b Created HHFCT_106809_cluster-16797_21_33
hsa-miR-548b-3p tattaatGGTTCTTa CAAGAACC m7b Disrupted HHFCT_106809_cluster-16797_21_33
hsa-miR-6512-5p tatTAATGGTtctta UACCAUUA m7b Disrupted HHFCT_106809_cluster-16797_21_33

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142562758G>A COSM3427168 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-369-3p cttactcGTATTATt AAUAAUAC m7b Disrupted HHFCT_106809_cluster-16797_21_33
hsa-miR-4517 cttacTCATATTatt AAAUAUGA m7b Created HHFCT_106809_cluster-16797_21_33
hsa-miR-5583-3p cttactCATATTatt GAAUAUGG m6b Created HHFCT_106809_cluster-16797_21_33
hsa-miR-5692b cttactcATATTATt AAUAAUAU m7b Created HHFCT_106809_cluster-16797_21_33
hsa-miR-5692c cttactcATATTATt AAUAAUAU m7b Created HHFCT_106809_cluster-16797_21_33
hsa-miR-6082 cttactCGTATTatt GAAUACGU m6b Disrupted HHFCT_106809_cluster-16797_21_33

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142562546G>A COSM4560760 CSCC-46-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-487a-5p ggatacTAACCAatt GUGGUUAU m6b Created HHFCT_106805_cluster-16797_17_1520
hsa-miR-487b-5p ggatacTAACCAatt GUGGUUAU m6b Created HHFCT_106805_cluster-16797_17_1520
hsa-miR-5587-5p ggatacTGACCAatt AUGGUCAC m6b Disrupted HHFCT_106805_cluster-16797_17_1520
hsa-miR-6801-5p ggataCTGACCAatt UGGUCAGA m7a Disrupted HHFCT_106805_cluster-16797_17_1520

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142562525G>T COSM1184200 587222 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6515-3p ctaTGAAGAGccatt UCUCUUCA m7b Disrupted HHFCT_106805_cluster-16797_17_1520
hsa-miR-6822-3p ctatgaAGAGCCatt AGGCUCUA m6b Disrupted HHFCT_106805_cluster-16797_17_1520
hsa-miR-760 ctatgaAGAGCCatt CGGCUCUG m6b Disrupted HHFCT_106805_cluster-16797_17_1520
hsa-miR-8057 ctatgaAGAGCCAtt GUGGCUCU m7b Disrupted HHFCT_106805_cluster-16797_17_1520

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142562509T>G COSM1039420 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-361-5p tcaaagCTGATAAag UUAUCAGA m7a Disrupted HHFCT_106805_cluster-16797_17_1520
hsa-miR-3617-3p tcaaaGCTGATaaag CAUCAGCA m6b Disrupted HHFCT_106805_cluster-16797_17_1520
hsa-miR-374a-3p tcaaagCTGATAAag CUUAUCAG m7b Disrupted HHFCT_106805_cluster-16797_17_1520
hsa-miR-4315 tcAAAGCGGataaag CCGCUUUC m7a (m6a->m7a) HHFCT_106805_cluster-16797_17_1520

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142562491C>T COSM3588282 TCGA-FS-A4F0-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4311 ctattTCTCTTTgaa GAAAGAGA m7b Created HHFCT_106804_cluster-16797_16_16
hsa-miR-539-5p ctATTTCTCtttgaa GGAGAAAU m7b (m6b->m7b) HHFCT_106804_cluster-16797_16_16
hsa-miR-5584-5p ctaTTTCCCTttgaa CAGGGAAA m7b Disrupted HHFCT_106804_cluster-16797_16_16
hsa-miR-583 ctatttCTCTTTGaa CAAAGAGG m7a Created HHFCT_106804_cluster-16797_16_16

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142562435G>A COSM4397191 TCGA-EE-A3JD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-3p gctgCTGAAAaaact CUUUCAGU m6b Created HPKTA_44352_G47745.1_142281286
hsa-miR-30d-3p gctgCTGAAAaaact CUUUCAGU m6b Created HPKTA_44352_G47745.1_142281286
hsa-miR-30e-3p gctgCTGAAAaaact CUUUCAGU m6b Created HPKTA_44352_G47745.1_142281286
hsa-miR-3180-5p gctgCTGGAAaaact CUUCCAGA m6b Disrupted HPKTA_44352_G47745.1_142281286
hsa-miR-335-3p gctgcTGAAAAAact UUUUUCAU m7a Created HPKTA_44352_G47745.1_142281286
hsa-miR-338-3p gcTGCTGGAaaaact UCCAGCAU m7a (m7a->m6a) HPKTA_44352_G47745.1_142281286
hsa-miR-3619-5p gCTGCTGAaaaaact UCAGCAGG m7a Created HPKTA_44352_G47745.1_142281286
hsa-miR-4291 gCTGCTGAAaaaact UUCAGCAG m8a (m7a->m8a) HPKTA_44352_G47745.1_142281286
hsa-miR-4530 gCTGCTGGaaaaact CCCAGCAG m7b Disrupted HPKTA_44352_G47745.1_142281286
hsa-miR-6512-3p gctGCTGGAAaaact UUCCAGCC m7a Disrupted HPKTA_44352_G47745.1_142281286
hsa-miR-6720-5p gctGCTGGAAaaact UUCCAGCC m7a Disrupted HPKTA_44352_G47745.1_142281286
hsa-miR-30a-3p gctgCTGAAAaaact CUUUCAGU m6b Created HPRO6_56038_G66680.1_142281286
hsa-miR-30d-3p gctgCTGAAAaaact CUUUCAGU m6b Created HPRO6_56038_G66680.1_142281286
hsa-miR-30e-3p gctgCTGAAAaaact CUUUCAGU m6b Created HPRO6_56038_G66680.1_142281286
hsa-miR-3180-5p gctgCTGGAAaaact CUUCCAGA m6b Disrupted HPRO6_56038_G66680.1_142281286
hsa-miR-335-3p gctgcTGAAAAAact UUUUUCAU m7a Created HPRO6_56038_G66680.1_142281286
hsa-miR-338-3p gcTGCTGGAaaaact UCCAGCAU m7a (m7a->m6a) HPRO6_56038_G66680.1_142281286
hsa-miR-3619-5p gCTGCTGAaaaaact UCAGCAGG m7a Created HPRO6_56038_G66680.1_142281286
hsa-miR-4291 gCTGCTGAAaaaact UUCAGCAG m8a (m7a->m8a) HPRO6_56038_G66680.1_142281286
hsa-miR-4530 gCTGCTGGaaaaact CCCAGCAG m7b Disrupted HPRO6_56038_G66680.1_142281286
hsa-miR-6512-3p gctGCTGGAAaaact UUCCAGCC m7a Disrupted HPRO6_56038_G66680.1_142281286
hsa-miR-6720-5p gctGCTGGAAaaact UUCCAGCC m7a Disrupted HPRO6_56038_G66680.1_142281286
hsa-miR-30a-3p gctgCTGAAAaaact CUUUCAGU m6b Created HPSEF_16142_G19432.1_142281287
hsa-miR-30d-3p gctgCTGAAAaaact CUUUCAGU m6b Created HPSEF_16142_G19432.1_142281287
hsa-miR-30e-3p gctgCTGAAAaaact CUUUCAGU m6b Created HPSEF_16142_G19432.1_142281287
hsa-miR-3180-5p gctgCTGGAAaaact CUUCCAGA m6b Disrupted HPSEF_16142_G19432.1_142281287
hsa-miR-335-3p gctgcTGAAAAAact UUUUUCAU m7a Created HPSEF_16142_G19432.1_142281287
hsa-miR-338-3p gcTGCTGGAaaaact UCCAGCAU m7a (m7a->m6a) HPSEF_16142_G19432.1_142281287
hsa-miR-3619-5p gCTGCTGAaaaaact UCAGCAGG m7a Created HPSEF_16142_G19432.1_142281287
hsa-miR-4291 gCTGCTGAAaaaact UUCAGCAG m8a (m7a->m8a) HPSEF_16142_G19432.1_142281287
hsa-miR-4530 gCTGCTGGaaaaact CCCAGCAG m7b Disrupted HPSEF_16142_G19432.1_142281287
hsa-miR-6512-3p gctGCTGGAAaaact UUCCAGCC m7a Disrupted HPSEF_16142_G19432.1_142281287
hsa-miR-6720-5p gctGCTGGAAaaact UUCCAGCC m7a Disrupted HPSEF_16142_G19432.1_142281287

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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