SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0067652
Gene Symbol: ATR
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr3:g.142561371C>T COSM3588280 TCGA-EE-A29E-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-580-5p tggaAATCATTgagg UAAUGAUU m7b Disrupted HHFKP_99224_cluster-16797_21_371

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142561362G>C COSM4523737 CSCC-44-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4279 ttGAGGAGAttcaat CUCUCCUC m7b (m7b->m6b) HHFKP_99224_cluster-16797_21_371

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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