SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0067631
Gene Symbol: ATR
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.142508062G>A COSM1419631 TCGA-AA-3496-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-329-5p ttttctAAACCTCat GAGGUUUU m7a Created HHHNE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-377-5p ttttctaAACCTCat AGAGGUUG m6b Created HHHNE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-4748 ttttctAAACCTCat GAGGUUUG m7a Created HHHNE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-601 ttttCTAGACCtcat UGGUCUAG m7b Disrupted HHHNE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-6086 ttttctaAACCTCat GGAGGUUG m6b Created HHHNE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-6508-5p tTTTCTAGAcctcat UCUAGAAA m8a (m8a->m7a) HHHNE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-655-5p ttttctaAACCTCat AGAGGUUA m6b Created HHHNE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-8067 tTTTCTAGacctcat CCUAGAAA m7b Disrupted HHHNE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-329-5p ttttctAAACCTCat GAGGUUUU m7a Created HHHSE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-377-5p ttttctaAACCTCat AGAGGUUG m6b Created HHHSE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-4748 ttttctAAACCTCat GAGGUUUG m7a Created HHHSE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-601 ttttCTAGACCtcat UGGUCUAG m7b Disrupted HHHSE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-6086 ttttctaAACCTCat GGAGGUUG m6b Created HHHSE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-6508-5p tTTTCTAGAcctcat UCUAGAAA m8a (m8a->m7a) HHHSE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-655-5p ttttctaAACCTCat AGAGGUUA m6b Created HHHSE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601
hsa-miR-8067 tTTTCTAGacctcat CCUAGAAA m7b Disrupted HHHSE_1638_ATR|NM_001184|exon_CDS|-6.69717926440624|-0.0874196944400601

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142505264G>A COSM3974199 TCGA-HT-7689-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3176 agtGGCCAGagtcag ACUGGCCU m6b Created HHFCT_106798_cluster-16797_10_142
hsa-miR-3190-5p agTGGCCAGAgtcag UCUGGCCA m8a Created HHFCT_106798_cluster-16797_10_142
hsa-miR-4522 agtggcCAGAGTCAg UGACUCUG m8a Created HHFCT_106798_cluster-16797_10_142
hsa-miR-4701-5p aGTGGCCAgagtcag UUGGCCAC m7b Created HHFCT_106798_cluster-16797_10_142
hsa-miR-514a-5p agtggCCAGAGTcag UACUCUGG m7b Created HHFCT_106798_cluster-16797_10_142
hsa-miR-588 aGTGGCCAgagtcag UUGGCCAC m7b Created HHFCT_106798_cluster-16797_10_142
hsa-miR-6850-3p agtGGCCGGagtcag CCCGGCCG m6b Disrupted HHFCT_106798_cluster-16797_10_142

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142505239A>C COSM581780 TCGA-91-6829-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-152-5p aaggCAGAACCatct AGGUUCUG m7b Disrupted HHFCT_106798_cluster-16797_10_142
hsa-miR-218-2-3p aaggcaGAACCATct CAUGGUUC m7b Disrupted HHFCT_106798_cluster-16797_10_142
hsa-miR-3907 aaggcAGCACCatct AGGUGCUC m6b Created HHFCT_106798_cluster-16797_10_142
hsa-miR-4727-5p aaGGCAGAaccatct AUCUGCCA m6b Disrupted HHFCT_106798_cluster-16797_10_142
hsa-miR-5001-3p aAGGCAGAAccatct UUCUGCCU m8a (m8a->m7a) HHFCT_106798_cluster-16797_10_142
hsa-miR-6738-3p aaGGCAGAAccatct CUUCUGCC m7b (m7b->m6b) HHFCT_106798_cluster-16797_10_142
hsa-miR-6882-3p aAGGCAGCAccatct UGCUGCCU m8a (m7a->m8a) HHFCT_106798_cluster-16797_10_142
hsa-miR-8069 aaggcagAACCATCt GGAUGGUU m7b Disrupted HHFCT_106798_cluster-16797_10_142

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142497144G>A COSM4915685 TCGA-DD-A1EF-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3135b tttTCCAGCattctc GGCUGGAG m6b Disrupted HHFKP_99217_cluster-16797_13_57
hsa-miR-409-3p ttttcCAACATTCtc GAAUGUUG m8a Created HHFKP_99217_cluster-16797_13_57
hsa-miR-4781-3p ttttCCAACATTctc AAUGUUGG m8a Created HHFKP_99217_cluster-16797_13_57

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142493194G>T COSM205525 TCGA-AA-3543-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3136-3p gctactaTTGGGCCg UGGCCCAA m7b Created HHFKP_99216_cluster-16797_12_41
hsa-miR-325 gCTACTAGtgggccg CCUAGUAG m7b Disrupted HHFKP_99216_cluster-16797_12_41
hsa-miR-3923 gcTACTAGTgggccg AACUAGUA m7b (m7b->m6b) HHFKP_99216_cluster-16797_12_41
hsa-miR-4301 gctacTAGTGGGccg UCCCACUA m7b Disrupted HHFKP_99216_cluster-16797_12_41
hsa-miR-7155-3p gctactaTTGGGCCg UGGCCCAA m7b Created HHFKP_99216_cluster-16797_12_41

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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