SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0067625
Gene Symbol: ATR
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr3:g.142459357C>T COSM1039349 TCGA-AN-A046-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3128 agaactTTGCCAGtg UCUGGCAA m7b Created HHFKP_99210_cluster-16797_6_58
hsa-miR-148a-5p AGAACTTTgccagtg AAAGUUCU m8a Created HHFKP_99210_cluster-16797_6_58

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142459356G>A COSM212642 SA227 [breast][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4299 gaactTCACCAGtgt GCUGGUGA m7b Created HHFKP_99210_cluster-16797_6_58

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142459350G>C COSM728982 TCGA-22-4599-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4499 cgcCAGTCTatgcta AAGACUGA m6b Created HHFKP_99210_cluster-16797_6_58
hsa-miR-4463 cgCCAGTCTatgcta GAGACUGG m7b (m6b->m7b) HHFKP_99210_cluster-16797_6_58
hsa-miR-151a-3p cgcCAGTCTAtgcta CUAGACUG m7b Created HHFKP_99210_cluster-16797_6_58
hsa-miR-6757-3p cgCCAGTGTatgcta AACACUGG m7b (m7b->m6b) HHFKP_99210_cluster-16797_6_58
hsa-miR-5689 cgccagTGTATGCTa AGCAUACA m8a Disrupted HHFKP_99210_cluster-16797_6_58

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142459346G>A COSM3767072 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5689 agTGTATGCTaccaa AGCAUACA m8a Disrupted HHFKP_99210_cluster-16797_6_58
hsa-miR-4789-5p aGTGTATACtaccaa GUAUACAC m8a (m7a->m8a) HHFKP_99210_cluster-16797_6_58

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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