SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0067622
Gene Symbol: ATR
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.142453165C>T COSM445724 TCGA-A2-A04W-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-891a-3p tccaaaGTGCCACTg AGUGGCAC m8a Created HHFKP_99208_cluster-16797_4_356

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142453164G>A COSM1419622 P100 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3907 ccaaAGCACCactga AGGUGCUC m6b Created HHFKP_99208_cluster-16797_4_356
hsa-miR-140-5p ccaaagcACCACTGa CAGUGGUU m7a Created HHFKP_99208_cluster-16797_4_356
hsa-miR-3677-5p ccaaagcGCCACTGa CAGUGGCC m7a Disrupted HHFKP_99208_cluster-16797_4_356
hsa-miR-5693 ccaaagcGCCACTGa GCAGUGGC m7b Disrupted HHFKP_99208_cluster-16797_4_356

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142453154G>A COSM581786 TCGA-64-1677-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4328 actgaatAAAACTGg CCAGUUUU m7b Created HHFKP_99208_cluster-16797_4_356
hsa-miR-892c-5p aCTGAATAaaactgg UAUUCAGA m7a Created HHFKP_99208_cluster-16797_4_356
hsa-miR-1298-5p actGAATGAAactgg UUCAUUCG m7a Disrupted HHFKP_99208_cluster-16797_4_356

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142453150C>A COSM1039343 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4328 aatgAAACTGGagaa CCAGUUUU m7a Disrupted HHFKP_99208_cluster-16797_4_356
hsa-miR-1250-3p aatGAAAATGgagaa ACAUUUUC m7b Created HHFKP_99208_cluster-16797_4_356
hsa-miR-136-5p aatgaaAATGGAGaa ACUCCAUU m7b Created HHFKP_99208_cluster-16797_4_356
hsa-miR-145-5p aatgaAACTGGAgaa GUCCAGUU m7b Disrupted HHFKP_99208_cluster-16797_4_356
hsa-miR-335-3p aATGAAAAtggagaa UUUUUCAU m7b Created HHFKP_99208_cluster-16797_4_356
hsa-miR-3925-3p aatgaaACTGGAGaa ACUCCAGU m7b Disrupted HHFKP_99208_cluster-16797_4_356
hsa-miR-5195-3p aatgaAACTGGAgaa AUCCAGUU m7b Disrupted HHFKP_99208_cluster-16797_4_356
hsa-miR-766-3p aatgaaaCTGGAGaa ACUCCAGC m6b Disrupted HHFKP_99208_cluster-16797_4_356

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142453137C>A COSM4774072 GC_357T-GC_357N [stomach][NS][carcinoma][diffuse_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5696 aagttgTAAATGAaa CUCAUUUA m7b Created HHFKP_99208_cluster-16797_4_356
hsa-miR-4729 aagttgTAAATGAaa UCAUUUAU m7a Created HHFKP_99208_cluster-16797_4_356
hsa-miR-549a aAGTTGTCAatgaaa UGACAACU m8a (m8a->m7a) HHFKP_99208_cluster-16797_4_356
hsa-miR-579-3p aagttgtAAATGAAa UUCAUUUG m7a Created HHFKP_99208_cluster-16797_4_356
hsa-miR-664b-3p aagttgtAAATGAAa UUCAUUUG m7a Created HHFKP_99208_cluster-16797_4_356

Mutation Mutation ID Sample Name Cancer Type
chr3:g.142453128G>T COSM1039341 TCGA-A5-A0G9-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3143 atgaaAATGTTAgta AUAACAUU m7b Created HHFKP_99208_cluster-16797_4_356
hsa-miR-543 atgaaAATGTTagta AAACAUUC m6b Created HHFKP_99208_cluster-16797_4_356
hsa-miR-1250-3p atGAAAATGTtagta ACAUUUUC m8a Created HHFKP_99208_cluster-16797_4_356

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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