SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001184 |
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Gene Symbol: | ATR |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr3:g.142449511G>A | COSM48248 | TCGA-G4-6315-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2116-5p | attgAAGAACatgtg | GGUUCUUA | m6b | Created | HHFKP_99207_cluster-16797_3_39 |
hsa-miR-22-5p | attGAAGAACatgtg | AGUUCUUC | m7b | Created | HHFKP_99207_cluster-16797_3_39 |
hsa-miR-4677-5p | attgAAGAACAtgtg | UUGUUCUU | m7b | Created | HHFKP_99207_cluster-16797_3_39 |
hsa-miR-676-5p | aTTGAAGAacatgtg | UCUUCAAC | m7a | Created | HHFKP_99207_cluster-16797_3_39 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.142449510A>G | COSM1419621 | TCGA-AD-6889-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-6886-3p | ttGAAGGGCAtgtgc | UGCCCUUC | m8a | Created | HHFKP_99207_cluster-16797_3_39 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.142449460A>C | COSM3427166 | TCGA-EI-6883-01 | [large_intestine][rectum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3126-3p | ctatGCCAGATGtat | CAUCUGGC | m8a | Disrupted | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-3945 | cTATGCCCgatgtat | AGGGCAUA | m7b | Created | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-4720-5p | ctATGCCAGatgtat | CCUGGCAU | m7b | (m7b->m6b) | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-4799-3p | ctATGCCAGatgtat | ACUGGCAU | m7b | (m7b->m6b) | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-5588-5p | ctATGCCAGatgtat | ACUGGCAU | m7b | (m7b->m6b) | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-6862-5p | ctATGCCCGatgtat | CGGGCAUG | m7a | (m6a->m7a) | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-6868-5p | ctaTGCCAGatgtat | ACUGGCAG | m6b | Disrupted | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-7112-5p | ctaTGCCCGatgtat | ACGGGCAG | m6b | Created | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-3126-3p | ctatGCCAGATGtat | CAUCUGGC | m8a | Disrupted | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-3945 | cTATGCCCgatgtat | AGGGCAUA | m7b | Created | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-4720-5p | ctATGCCAGatgtat | CCUGGCAU | m7b | (m7b->m6b) | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-4799-3p | ctATGCCAGatgtat | ACUGGCAU | m7b | (m7b->m6b) | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-5588-5p | ctATGCCAGatgtat | ACUGGCAU | m7b | (m7b->m6b) | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-6862-5p | ctATGCCCGatgtat | CGGGCAUG | m7a | (m6a->m7a) | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-6868-5p | ctaTGCCAGatgtat | ACUGGCAG | m6b | Disrupted | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-7112-5p | ctaTGCCCGatgtat | ACGGGCAG | m6b | Created | HHFKP_99206_cluster-16797_2_93 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.142449459G>C | COSM1308679 | TCGA-G2-A2EO-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3126-3p | tatGCCAGATGtatc | CAUCUGGC | m8a | Disrupted | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-3688-5p | taTGCCACatgtatc | AGUGGCAA | m6b | Created | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-4666a-5p | tatgccACATGTATc | AUACAUGU | m8a | Created | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-4720-5p | tATGCCAGatgtatc | CCUGGCAU | m7b | Disrupted | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-4799-3p | tATGCCAGatgtatc | ACUGGCAU | m7b | Disrupted | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-5588-5p | tATGCCAGatgtatc | ACUGGCAU | m7b | Disrupted | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-6868-5p | taTGCCAGatgtatc | ACUGGCAG | m6b | Disrupted | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-3126-3p | tatGCCAGATGtatc | CAUCUGGC | m8a | Disrupted | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-3688-5p | taTGCCACatgtatc | AGUGGCAA | m6b | Created | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-4666a-5p | tatgccACATGTATc | AUACAUGU | m8a | Created | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-4720-5p | tATGCCAGatgtatc | CCUGGCAU | m7b | Disrupted | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-4799-3p | tATGCCAGatgtatc | ACUGGCAU | m7b | Disrupted | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-5588-5p | tATGCCAGatgtatc | ACUGGCAU | m7b | Disrupted | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-6868-5p | taTGCCAGatgtatc | ACUGGCAG | m6b | Disrupted | HHFKP_99206_cluster-16797_2_93 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.142449454A>G | COSM3125086 | 454 | [urinary_tract][bladder][carcinoma][transitional_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-642a-3p | cagATGTGTCTtggt | AGACACAU | m8a | Created | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-642b-3p | cagATGTGTCTtggt | AGACACAU | m8a | Created | HHFCT_106791_cluster-16797_2_38 |
hsa-miR-642a-3p | cagATGTGTCTtggt | AGACACAU | m8a | Created | HHFKP_99206_cluster-16797_2_93 |
hsa-miR-642b-3p | cagATGTGTCTtggt | AGACACAU | m8a | Created | HHFKP_99206_cluster-16797_2_93 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr3:g.142449451T>G | COSM4996292 | NPC37F | [upper_aerodigestive_tract][pharynx][carcinoma][nasopharyngeal_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |