SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0034396
Gene Symbol: ATPBD4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.35373564C>G COSM3678171 SNUH_G16_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-552-3p tttgCACCTGTggct AACAGGUG m7b Disrupted HHFCT_49670_cluster-7865_1_6
hsa-miR-6767-3p tttGCACGTGtggct CCACGUGC m7b Created HHFCT_49670_cluster-7865_1_6
hsa-miR-764 tttGCACCTGtggct GCAGGUGC m7b Disrupted HHFCT_49670_cluster-7865_1_6

Mutation Mutation ID Sample Name Cancer Type
chr15:g.35373559G>A COSM960943 TCGA-AX-A0J1-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-5p acctGTGACTTatct CAAGUCAC m7b Created HHFCT_49670_cluster-7865_1_6
hsa-miR-449b-3p accTGTGGCTtatct CAGCCACA m7b Disrupted HHFCT_49670_cluster-7865_1_6
hsa-miR-513a-5p aCCTGTGActtatct UUCACAGG m7b Created HHFCT_49670_cluster-7865_1_6
hsa-miR-224-5p acctGTGACTTatct CAAGUCAC m7b Created HHFKP_47419_cluster-7865_3_6
hsa-miR-449b-3p accTGTGGCTtatct CAGCCACA m7b Disrupted HHFKP_47419_cluster-7865_3_6
hsa-miR-513a-5p aCCTGTGActtatct UUCACAGG m7b Created HHFKP_47419_cluster-7865_3_6

Mutation Mutation ID Sample Name Cancer Type
chr15:g.35373555A>G COSM1678347 DU-145 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3935 gtggctTATCTACgc UGUAGAUA m7b Disrupted HHFCT_49670_cluster-7865_1_6
hsa-miR-3935 gtggctTATCTACgc UGUAGAUA m7b Disrupted HHFKP_47419_cluster-7865_3_6

Mutation Mutation ID Sample Name Cancer Type
chr15:g.35372282C>T COSN1674243 RK064_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2054 agTATTACAtctttg CUGUAAUA m7b (m7b->m6b) HPKMA_5094_G5937.1_35664493
hsa-miR-369-3p aGTATTATatctttg AAUAAUAC m7b Created HPKMA_5094_G5937.1_35664493
hsa-miR-374a-5p agTATTATAtctttg UUAUAAUA m7b (m6b->m7b) HPKMA_5094_G5937.1_35664493
hsa-miR-374b-5p agTATTATATctttg AUAUAAUA m8a Created HPKMA_5094_G5937.1_35664493
hsa-miR-374c-5p aGTATTATatctttg AUAAUACA m7a Created HPKMA_5094_G5937.1_35664493
hsa-miR-380-3p agtATTACATctttg UAUGUAAU m7b Disrupted HPKMA_5094_G5937.1_35664493
hsa-miR-5692b agTATTATatctttg AAUAAUAU m6b Created HPKMA_5094_G5937.1_35664493
hsa-miR-5692c agTATTATatctttg AAUAAUAU m6b Created HPKMA_5094_G5937.1_35664493
hsa-miR-655-3p aGTATTATatctttg AUAAUACA m7a Created HPKMA_5094_G5937.1_35664493
hsa-miR-2054 agTATTACAtctttg CUGUAAUA m7b (m7b->m6b) HPKMB_2738_G3112.1_35664484
hsa-miR-369-3p aGTATTATatctttg AAUAAUAC m7b Created HPKMB_2738_G3112.1_35664484
hsa-miR-374a-5p agTATTATAtctttg UUAUAAUA m7b (m6b->m7b) HPKMB_2738_G3112.1_35664484
hsa-miR-374b-5p agTATTATATctttg AUAUAAUA m8a Created HPKMB_2738_G3112.1_35664484
hsa-miR-374c-5p aGTATTATatctttg AUAAUACA m7a Created HPKMB_2738_G3112.1_35664484
hsa-miR-380-3p agtATTACATctttg UAUGUAAU m7b Disrupted HPKMB_2738_G3112.1_35664484
hsa-miR-5692b agTATTATatctttg AAUAAUAU m6b Created HPKMB_2738_G3112.1_35664484
hsa-miR-5692c agTATTATatctttg AAUAAUAU m6b Created HPKMB_2738_G3112.1_35664484
hsa-miR-655-3p aGTATTATatctttg AUAAUACA m7a Created HPKMB_2738_G3112.1_35664484
hsa-miR-2054 agTATTACAtctttg CUGUAAUA m7b (m7b->m6b) HPKTA_21791_G23476.1_35664489
hsa-miR-369-3p aGTATTATatctttg AAUAAUAC m7b Created HPKTA_21791_G23476.1_35664489
hsa-miR-374a-5p agTATTATAtctttg UUAUAAUA m7b (m6b->m7b) HPKTA_21791_G23476.1_35664489
hsa-miR-374b-5p agTATTATATctttg AUAUAAUA m8a Created HPKTA_21791_G23476.1_35664489
hsa-miR-374c-5p aGTATTATatctttg AUAAUACA m7a Created HPKTA_21791_G23476.1_35664489
hsa-miR-380-3p agtATTACATctttg UAUGUAAU m7b Disrupted HPKTA_21791_G23476.1_35664489
hsa-miR-5692b agTATTATatctttg AAUAAUAU m6b Created HPKTA_21791_G23476.1_35664489
hsa-miR-5692c agTATTATatctttg AAUAAUAU m6b Created HPKTA_21791_G23476.1_35664489
hsa-miR-655-3p aGTATTATatctttg AUAAUACA m7a Created HPKTA_21791_G23476.1_35664489

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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