SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0024213
Gene Symbol: ATM
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr11:g.108252855G>A COSM200656 TCGA-AA-3518-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3672 cttgtgAGTCTCAct AUGAGACU m7b Disrupted HHFKP_29536_cluster-3823_8_11
hsa-miR-513b-5p CTTGTGAAtctcact UUCACAAG m8a Created HHFKP_29536_cluster-3823_8_11
hsa-miR-5186 cttgtgAATCTCact AGAGAUUG m6b Created HHFKP_29536_cluster-3823_8_11
hsa-miR-6864-3p cttgtgAGTCTCACt GUGAGACU m8a Disrupted HHFKP_29536_cluster-3823_8_11
hsa-miR-873-3p cttgtgAGTCTCact GGAGACUG m6b Disrupted HHFKP_29536_cluster-3823_8_11

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108252851G>T COSM1235410 MC034 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][mantle_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p aATTCTTTtgagtct CAAAGAAU m7b Created HHFKP_29536_cluster-3823_8_11
hsa-miR-371b-5p aattcTTTTGAGTct ACUCAAAA m8a Created HHFKP_29536_cluster-3823_8_11
hsa-miR-373-5p aattcTTTTGAGTct ACUCAAAA m8a Created HHFKP_29536_cluster-3823_8_11
hsa-miR-513b-5p aattCTTGTGAgtct UUCACAAG m7b Disrupted HHFKP_29536_cluster-3823_8_11
hsa-miR-616-5p aattcTTTTGAGTct ACUCAAAA m8a Created HHFKP_29536_cluster-3823_8_11
hsa-miR-888-5p aattctTTTGAGTct UACUCAAA m7b Created HHFKP_29536_cluster-3823_8_11

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108252848C>A COSM1350782 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4775 gAAAATTAttgtgag UUAAUUUU m7b Created HHFKP_29536_cluster-3823_8_11
hsa-miR-513b-5p gaaaattCTTGTGAg UUCACAAG m7b Disrupted HHFKP_29536_cluster-3823_8_11
hsa-miR-4775 gAAAATTAttgtgag UUAAUUUU m7b Created HHFKP_29536_cluster-3823_8_11
hsa-miR-513b-5p gaaaattCTTGTGAg UUCACAAG m7b Disrupted HHFKP_29536_cluster-3823_8_11

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108252831T>A COSM4664089 T3024 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1272 ccTCATCATgtactg GAUGAUGA m7b (m6b->m7b) HHFKP_29536_cluster-3823_8_11
hsa-miR-1272 ccTCATCATgtactg GAUGAUGA m7b (m6b->m7b) HHFKP_29536_cluster-3823_8_11

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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