SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0024208
Gene Symbol: ATM
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.108248987C>T COSM3724458 2139767 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3668 taCTACATaaagaga AAUGUAGA m6b Created HPCB1_7171_G9018.1_108119703
hsa-miR-3924 tacTACATAaagaga AUAUGUAU m6b Created HPCB1_7171_G9018.1_108119703
hsa-miR-5010-3p tactACACAAAgaga UUUUGUGU m7b Disrupted HPCB1_7171_G9018.1_108119703
hsa-miR-599 tactACACAAagaga GUUGUGUC m6b Disrupted HPCB1_7171_G9018.1_108119703
hsa-miR-6844 tactacACAAAGAga UUCUUUGU m7b Disrupted HPCB1_7171_G9018.1_108119703
hsa-miR-7852-3p tACTACATAaagaga UAUGUAGU m8a (m7a->m8a) HPCB1_7171_G9018.1_108119703
hsa-miR-3668 taCTACATaaagaga AAUGUAGA m6b Created HPCB3_3821_G5281.1_108119703
hsa-miR-3924 tacTACATAaagaga AUAUGUAU m6b Created HPCB3_3821_G5281.1_108119703
hsa-miR-5010-3p tactACACAAAgaga UUUUGUGU m7b Disrupted HPCB3_3821_G5281.1_108119703
hsa-miR-599 tactACACAAagaga GUUGUGUC m6b Disrupted HPCB3_3821_G5281.1_108119703
hsa-miR-6844 tactacACAAAGAga UUCUUUGU m7b Disrupted HPCB3_3821_G5281.1_108119703
hsa-miR-7852-3p tACTACATAaagaga UAUGUAGU m8a (m7a->m8a) HPCB3_3821_G5281.1_108119703
hsa-miR-3668 taCTACATaaagaga AAUGUAGA m6b Created HPSD1_1753_G2265.1_108119703
hsa-miR-3924 tacTACATAaagaga AUAUGUAU m6b Created HPSD1_1753_G2265.1_108119703
hsa-miR-5010-3p tactACACAAAgaga UUUUGUGU m7b Disrupted HPSD1_1753_G2265.1_108119703
hsa-miR-599 tactACACAAagaga GUUGUGUC m6b Disrupted HPSD1_1753_G2265.1_108119703
hsa-miR-6844 tactacACAAAGAga UUCUUUGU m7b Disrupted HPSD1_1753_G2265.1_108119703
hsa-miR-7852-3p tACTACATAaagaga UAUGUAGU m8a (m7a->m8a) HPSD1_1753_G2265.1_108119703
hsa-miR-3668 taCTACATaaagaga AAUGUAGA m6b Created HPSD3_1824_G2467.1_108119703
hsa-miR-3924 tacTACATAaagaga AUAUGUAU m6b Created HPSD3_1824_G2467.1_108119703
hsa-miR-5010-3p tactACACAAAgaga UUUUGUGU m7b Disrupted HPSD3_1824_G2467.1_108119703
hsa-miR-599 tactACACAAagaga GUUGUGUC m6b Disrupted HPSD3_1824_G2467.1_108119703
hsa-miR-6844 tactacACAAAGAga UUCUUUGU m7b Disrupted HPSD3_1824_G2467.1_108119703
hsa-miR-7852-3p tACTACATAaagaga UAUGUAGU m8a (m7a->m8a) HPSD3_1824_G2467.1_108119703
hsa-miR-3668 taCTACATaaagaga AAUGUAGA m6b Created HPSLB_1352_G1653.1_108119703
hsa-miR-3924 tacTACATAaagaga AUAUGUAU m6b Created HPSLB_1352_G1653.1_108119703
hsa-miR-5010-3p tactACACAAAgaga UUUUGUGU m7b Disrupted HPSLB_1352_G1653.1_108119703
hsa-miR-599 tactACACAAagaga GUUGUGUC m6b Disrupted HPSLB_1352_G1653.1_108119703
hsa-miR-6844 tactacACAAAGAga UUCUUUGU m7b Disrupted HPSLB_1352_G1653.1_108119703
hsa-miR-7852-3p tACTACATAaagaga UAUGUAGU m8a (m7a->m8a) HPSLB_1352_G1653.1_108119703
hsa-miR-3668 taCTACATaaagaga AAUGUAGA m6b Created HPSLC_3466_G4105.1_108119703
hsa-miR-3924 tacTACATAaagaga AUAUGUAU m6b Created HPSLC_3466_G4105.1_108119703
hsa-miR-5010-3p tactACACAAAgaga UUUUGUGU m7b Disrupted HPSLC_3466_G4105.1_108119703
hsa-miR-599 tactACACAAagaga GUUGUGUC m6b Disrupted HPSLC_3466_G4105.1_108119703
hsa-miR-6844 tactacACAAAGAga UUCUUUGU m7b Disrupted HPSLC_3466_G4105.1_108119703
hsa-miR-7852-3p tACTACATAaagaga UAUGUAGU m8a (m7a->m8a) HPSLC_3466_G4105.1_108119703

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108248967C>T COSM922705 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPCB1_7171_G9018.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPCB1_7171_G9018.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPCB1_7171_G9018.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPCB1_7171_G9018.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPCB3_3821_G5281.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPCB3_3821_G5281.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPCB3_3821_G5281.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPCB3_3821_G5281.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPSD1_1753_G2265.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPSD1_1753_G2265.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPSD1_1753_G2265.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPSD1_1753_G2265.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPSD3_1824_G2467.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPSD3_1824_G2467.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPSD3_1824_G2467.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPSD3_1824_G2467.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPSEF_4060_G4873.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPSEF_4060_G4873.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPSEF_4060_G4873.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPSEF_4060_G4873.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPSLB_1352_G1653.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPSLB_1352_G1653.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPSLB_1352_G1653.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPSLB_1352_G1653.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPSLC_3466_G4105.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPSLC_3466_G4105.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPSLC_3466_G4105.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPSLC_3466_G4105.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPCB1_7171_G9018.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPCB1_7171_G9018.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPCB1_7171_G9018.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPCB1_7171_G9018.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPCB3_3821_G5281.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPCB3_3821_G5281.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPCB3_3821_G5281.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPCB3_3821_G5281.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPSD1_1753_G2265.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPSD1_1753_G2265.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPSD1_1753_G2265.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPSD1_1753_G2265.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPSD3_1824_G2467.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPSD3_1824_G2467.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPSD3_1824_G2467.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPSD3_1824_G2467.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPSEF_4060_G4873.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPSEF_4060_G4873.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPSEF_4060_G4873.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPSEF_4060_G4873.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPSLB_1352_G1653.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPSLB_1352_G1653.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPSLB_1352_G1653.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPSLB_1352_G1653.1_108119703
hsa-miR-4461 gagattTCTCAATCt GAUUGAGA m8a Disrupted HPSLC_3466_G4105.1_108119703
hsa-miR-539-5p gagATTTCTCaatct GGAGAAAU m7b Disrupted HPSLC_3466_G4105.1_108119703
hsa-miR-548c-3p gaGATTTTTcaatct CAAAAAUC m7b (m6b->m7b) HPSLC_3466_G4105.1_108119703
hsa-miR-5680 gagATTTCTCaatct GAGAAAUG m7a Disrupted HPSLC_3466_G4105.1_108119703

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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