SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0024203
Gene Symbol: ATM
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.108235750G>A COSM1350731 TCGA-02-0010-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3607-3p taTTTACAGagctga ACUGUAAA m7b (m6b->m7b) HPKTA_11187_G12022.1_108106463
hsa-miR-3686 tatTTACAGAgctga AUCUGUAA m7b Created HPKTA_11187_G12022.1_108106463
hsa-miR-6736-3p tatttacGGAGCTGa UCAGCUCC m7b Disrupted HPKTA_11187_G12022.1_108106463
hsa-miR-3607-3p taTTTACAGagctga ACUGUAAA m7b (m6b->m7b) HPSD1_1752_G2264.1_108106464
hsa-miR-3686 tatTTACAGAgctga AUCUGUAA m7b Created HPSD1_1752_G2264.1_108106464
hsa-miR-6736-3p tatttacGGAGCTGa UCAGCUCC m7b Disrupted HPSD1_1752_G2264.1_108106464
hsa-miR-3607-3p taTTTACAGagctga ACUGUAAA m7b (m6b->m7b) HPKTA_11187_G12022.1_108106463
hsa-miR-3686 tatTTACAGAgctga AUCUGUAA m7b Created HPKTA_11187_G12022.1_108106463
hsa-miR-6736-3p tatttacGGAGCTGa UCAGCUCC m7b Disrupted HPKTA_11187_G12022.1_108106463
hsa-miR-3607-3p taTTTACAGagctga ACUGUAAA m7b (m6b->m7b) HPSD1_1752_G2264.1_108106464
hsa-miR-3686 tatTTACAGAgctga AUCUGUAA m7b Created HPSD1_1752_G2264.1_108106464
hsa-miR-6736-3p tatttacGGAGCTGa UCAGCUCC m7b Disrupted HPSD1_1752_G2264.1_108106464

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108235744AT>A COSM1474979 TCGA-AO-A129-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29a-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPKTA_11187_G12022.1_108106463
hsa-miR-29b-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPKTA_11187_G12022.1_108106463
hsa-miR-29c-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPKTA_11187_G12022.1_108106463
hsa-miR-5682 tGGTGCTAtttacgga GUAGCACC m7b Disrupted HPKTA_11187_G12022.1_108106463
hsa-miR-633 tggtgCTATTAcgga CUAAUAGU m6b Created HPKTA_11187_G12022.1_108106463
hsa-miR-29a-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPSD1_1752_G2264.1_108106464
hsa-miR-29b-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPSD1_1752_G2264.1_108106464
hsa-miR-29c-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPSD1_1752_G2264.1_108106464
hsa-miR-5682 tGGTGCTAtttacgga GUAGCACC m7b Disrupted HPSD1_1752_G2264.1_108106464
hsa-miR-633 tggtgCTATTAcgga CUAAUAGU m6b Created HPSD1_1752_G2264.1_108106464
hsa-miR-29a-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPKTA_11187_G12022.1_108106463
hsa-miR-29b-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPKTA_11187_G12022.1_108106463
hsa-miR-29c-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPKTA_11187_G12022.1_108106463
hsa-miR-5682 tGGTGCTAtttacgga GUAGCACC m7b Disrupted HPKTA_11187_G12022.1_108106463
hsa-miR-633 tggtgCTATTAcgga CUAAUAGU m6b Created HPKTA_11187_G12022.1_108106463
hsa-miR-29a-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPSD1_1752_G2264.1_108106464
hsa-miR-29b-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPSD1_1752_G2264.1_108106464
hsa-miR-29c-3p TGGTGCTAtttacgga UAGCACCA m8a Disrupted HPSD1_1752_G2264.1_108106464
hsa-miR-5682 tGGTGCTAtttacgga GUAGCACC m7b Disrupted HPSD1_1752_G2264.1_108106464
hsa-miR-633 tggtgCTATTAcgga CUAAUAGU m6b Created HPSD1_1752_G2264.1_108106464

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108235730C>A COSM1585372 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376a-5p aaagattAATCTAat GUAGAUUC m6b Created HPKTA_11187_G12022.1_108106463
hsa-miR-4760-5p aaagattAATCTAAt UUUAGAUU m7b Created HPKTA_11187_G12022.1_108106463
hsa-miR-8061 aaagattAATCTAAt CUUAGAUU m7b Created HPKTA_11187_G12022.1_108106463
hsa-miR-376a-5p aaagattAATCTAat GUAGAUUC m6b Created HPSD1_1752_G2264.1_108106464
hsa-miR-4760-5p aaagattAATCTAAt UUUAGAUU m7b Created HPSD1_1752_G2264.1_108106464
hsa-miR-8061 aaagattAATCTAAt CUUAGAUU m7b Created HPSD1_1752_G2264.1_108106464
hsa-miR-376a-5p aaagattAATCTAat GUAGAUUC m6b Created HPKTA_11187_G12022.1_108106463
hsa-miR-4760-5p aaagattAATCTAAt UUUAGAUU m7b Created HPKTA_11187_G12022.1_108106463
hsa-miR-8061 aaagattAATCTAAt CUUAGAUU m7b Created HPKTA_11187_G12022.1_108106463
hsa-miR-376a-5p aaagattAATCTAat GUAGAUUC m6b Created HPSD1_1752_G2264.1_108106464
hsa-miR-4760-5p aaagattAATCTAAt UUUAGAUU m7b Created HPSD1_1752_G2264.1_108106464
hsa-miR-8061 aaagattAATCTAAt CUUAGAUU m7b Created HPSD1_1752_G2264.1_108106464

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108235726G>T COSM2110328 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-3p agTGAAATattcatc GAUUUCAG m6b Created HPKTA_11187_G12022.1_108106463
hsa-miR-205-3p agTGAAATattcatc GAUUUCAG m6b Created HPSD1_1752_G2264.1_108106464
hsa-miR-205-3p agTGAAATattcatc GAUUUCAG m6b Created HPKTA_11187_G12022.1_108106463
hsa-miR-205-3p agTGAAATattcatc GAUUUCAG m6b Created HPSD1_1752_G2264.1_108106464

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108229311T>C COSM4574020 07-P075 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5589-3p catcaaATGTGCAaa UGCACAUG m7a Disrupted HPCB1_7168_G9015.1_108100038
hsa-miR-5707 caTCAAACGTgcaaa ACGUUUGA m8a Created HPCB1_7168_G9015.1_108100038
hsa-miR-5589-3p catcaaATGTGCAaa UGCACAUG m7a Disrupted HPKTA_11186_G12021.1_108100038
hsa-miR-5707 caTCAAACGTgcaaa ACGUUUGA m8a Created HPKTA_11186_G12021.1_108100038
hsa-miR-5589-3p catcaaATGTGCAaa UGCACAUG m7a Disrupted HPRO6_14955_G17504.1_108100038
hsa-miR-5707 caTCAAACGTgcaaa ACGUUUGA m8a Created HPRO6_14955_G17504.1_108100038
hsa-miR-5589-3p catcaaATGTGCAaa UGCACAUG m7a Disrupted HPSLB_1351_G1652.1_108100038
hsa-miR-5707 caTCAAACGTgcaaa ACGUUUGA m8a Created HPSLB_1351_G1652.1_108100038
hsa-miR-5589-3p catcaaATGTGCAaa UGCACAUG m7a Disrupted HHFKP_29535_cluster-3823_7_12
hsa-miR-5707 caTCAAACGTgcaaa ACGUUUGA m8a Created HHFKP_29535_cluster-3823_7_12
hsa-miR-5589-3p catcaaATGTGCAaa UGCACAUG m7a Disrupted HPCB1_7168_G9015.1_108100038
hsa-miR-5707 caTCAAACGTgcaaa ACGUUUGA m8a Created HPCB1_7168_G9015.1_108100038
hsa-miR-5589-3p catcaaATGTGCAaa UGCACAUG m7a Disrupted HPKTA_11186_G12021.1_108100038
hsa-miR-5707 caTCAAACGTgcaaa ACGUUUGA m8a Created HPKTA_11186_G12021.1_108100038
hsa-miR-5589-3p catcaaATGTGCAaa UGCACAUG m7a Disrupted HPRO6_14955_G17504.1_108100038
hsa-miR-5707 caTCAAACGTgcaaa ACGUUUGA m8a Created HPRO6_14955_G17504.1_108100038
hsa-miR-5589-3p catcaaATGTGCAaa UGCACAUG m7a Disrupted HPSLB_1351_G1652.1_108100038
hsa-miR-5707 caTCAAACGTgcaaa ACGUUUGA m8a Created HPSLB_1351_G1652.1_108100038
hsa-miR-5589-3p catcaaATGTGCAaa UGCACAUG m7a Disrupted HHFKP_29535_cluster-3823_7_12
hsa-miR-5707 caTCAAACGTgcaaa ACGUUUGA m8a Created HHFKP_29535_cluster-3823_7_12

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108229309A>C COSM4664085 T3246 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3607-5p ttcaTCACATGtgca GCAUGUGA m7b Created HHFKP_29535_cluster-3823_7_12
hsa-miR-5589-3p ttcatcaCATGTGCa UGCACAUG m7b Created HHFKP_29535_cluster-3823_7_12
hsa-miR-3607-5p ttcaTCACATGtgca GCAUGUGA m7b Created HPCB1_7168_G9015.1_108100038
hsa-miR-5589-3p ttcatcaCATGTGCa UGCACAUG m7b Created HPCB1_7168_G9015.1_108100038
hsa-miR-3607-5p ttcaTCACATGtgca GCAUGUGA m7b Created HPKTA_11186_G12021.1_108100038
hsa-miR-5589-3p ttcatcaCATGTGCa UGCACAUG m7b Created HPKTA_11186_G12021.1_108100038
hsa-miR-3607-5p ttcaTCACATGtgca GCAUGUGA m7b Created HPRO6_14955_G17504.1_108100038
hsa-miR-5589-3p ttcatcaCATGTGCa UGCACAUG m7b Created HPRO6_14955_G17504.1_108100038
hsa-miR-3607-5p ttcaTCACATGtgca GCAUGUGA m7b Created HPSLB_1351_G1652.1_108100038
hsa-miR-5589-3p ttcatcaCATGTGCa UGCACAUG m7b Created HPSLB_1351_G1652.1_108100038
hsa-miR-3607-5p ttcaTCACATGtgca GCAUGUGA m7b Created HHFKP_29535_cluster-3823_7_12
hsa-miR-5589-3p ttcatcaCATGTGCa UGCACAUG m7b Created HHFKP_29535_cluster-3823_7_12
hsa-miR-3607-5p ttcaTCACATGtgca GCAUGUGA m7b Created HPCB1_7168_G9015.1_108100038
hsa-miR-5589-3p ttcatcaCATGTGCa UGCACAUG m7b Created HPCB1_7168_G9015.1_108100038
hsa-miR-3607-5p ttcaTCACATGtgca GCAUGUGA m7b Created HPKTA_11186_G12021.1_108100038
hsa-miR-5589-3p ttcatcaCATGTGCa UGCACAUG m7b Created HPKTA_11186_G12021.1_108100038
hsa-miR-3607-5p ttcaTCACATGtgca GCAUGUGA m7b Created HPRO6_14955_G17504.1_108100038
hsa-miR-5589-3p ttcatcaCATGTGCa UGCACAUG m7b Created HPRO6_14955_G17504.1_108100038
hsa-miR-3607-5p ttcaTCACATGtgca GCAUGUGA m7b Created HPSLB_1351_G1652.1_108100038
hsa-miR-5589-3p ttcatcaCATGTGCa UGCACAUG m7b Created HPSLB_1351_G1652.1_108100038
Mutation Mutation ID Sample Name Cancer Type
chr11:g.108229307C>T COSM3808273 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr11:g.108229291T>G COSM922697 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1180-5p agtagtTGGGTCaaa GGACCCAC m6b Created HHFKP_29535_cluster-3823_7_12
hsa-miR-606 AGTAGTTTggtcaaa AAACUACU m8a Disrupted HHFKP_29535_cluster-3823_7_12
hsa-miR-7114-3p agtagtTGGGTCAaa UGACCCAC m7a Created HHFKP_29535_cluster-3823_7_12
hsa-miR-1180-5p agtagtTGGGTCaaa GGACCCAC m6b Created HHFKP_29535_cluster-3823_7_12
hsa-miR-606 AGTAGTTTggtcaaa AAACUACU m8a Disrupted HHFKP_29535_cluster-3823_7_12
hsa-miR-7114-3p agtagtTGGGTCAaa UGACCCAC m7a Created HHFKP_29535_cluster-3823_7_12

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108229230C>T COSM922696 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19a-5p aGCAAAACcaaatgt AGUUUUGC m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-19b-1-5p aGCAAAACcaaatgt AGUUUUGC m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-19b-2-5p aGCAAAACcaaatgt AGUUUUGC m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-29b-2-5p agcaAAACCAaatgt CUGGUUUC m6b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-5002-5p agcaaaACCAAATgt AAUUUGGU m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-659-3p agcaaAACCAAatgt CUUGGUUC m6b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-19a-5p aGCAAAACcaaatgt AGUUUUGC m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-19b-1-5p aGCAAAACcaaatgt AGUUUUGC m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-19b-2-5p aGCAAAACcaaatgt AGUUUUGC m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-29b-2-5p agcaAAACCAaatgt CUGGUUUC m6b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-5002-5p agcaaaACCAAATgt AAUUUGGU m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-659-3p agcaaAACCAAatgt CUUGGUUC m6b Disrupted HHFCT_30832_cluster-3823_2_288

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108229223A>T COSM3979082 2734_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p tgagaATTGCAaaac CUGCAAUG m6b Created HHFCT_30832_cluster-3823_2_288
hsa-miR-26a-1-3p tgAGAATAGcaaaac CCUAUUCU m7b (m7b->m6b) HHFCT_30832_cluster-3823_2_288
hsa-miR-26a-2-3p tgAGAATAGcaaaac CCUAUUCU m7b (m7b->m6b) HHFCT_30832_cluster-3823_2_288
hsa-miR-450b-5p tgagaaTTGCAAAAc UUUUGCAA m8a Created HHFCT_30832_cluster-3823_2_288
hsa-miR-557 tgagaatTGCAAAac GUUUGCAC m6b Created HHFCT_30832_cluster-3823_2_288
hsa-miR-5571-5p tGAGAATTGcaaaac CAAUUCUC m8a (m7a->m8a) HHFCT_30832_cluster-3823_2_288
hsa-miR-6885-3p tgagaatAGCAAAac CUUUGCUU m6b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-106a-3p tgagaATTGCAaaac CUGCAAUG m6b Created HHFCT_30832_cluster-3823_2_288
hsa-miR-26a-1-3p tgAGAATAGcaaaac CCUAUUCU m7b (m7b->m6b) HHFCT_30832_cluster-3823_2_288
hsa-miR-26a-2-3p tgAGAATAGcaaaac CCUAUUCU m7b (m7b->m6b) HHFCT_30832_cluster-3823_2_288
hsa-miR-450b-5p tgagaaTTGCAAAAc UUUUGCAA m8a Created HHFCT_30832_cluster-3823_2_288
hsa-miR-557 tgagaatTGCAAAac GUUUGCAC m6b Created HHFCT_30832_cluster-3823_2_288
hsa-miR-5571-5p tGAGAATTGcaaaac CAAUUCUC m8a (m7a->m8a) HHFCT_30832_cluster-3823_2_288
hsa-miR-6885-3p tgagaatAGCAAAac CUUUGCUU m6b Disrupted HHFCT_30832_cluster-3823_2_288

Mutation Mutation ID Sample Name Cancer Type
chr11:g.108229208AGA>A COSM3733362 1502 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4652-3p aagaAACAGAAtgtctg GUUCUGUU m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-4778-5p aagaaACAGAATgtctg AAUUCUGU m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-4652-3p aagaAACAGAAtgtctg GUUCUGUU m7b Disrupted HHFCT_30832_cluster-3823_2_288
hsa-miR-4778-5p aagaaACAGAATgtctg AAUUCUGU m7b Disrupted HHFCT_30832_cluster-3823_2_288

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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