SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0015035
Gene Symbol: ATF6
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.161962474A>G COSN1409525 RK035_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548b-3p ttttttGGTTCTTGc CAAGAACC m8a Created HHFKP_12888_cluster-844_15_21

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161958534G>A COSM4024465 TCGA-HU-A4G8-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4502 aaagtTCATCAGttc GCUGAUGA m7b Created HHFKP_12884_cluster-844_11_186

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161958533C>T COSM174669 TCGA-EE-A20F-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-888-3p aaaagttTGTCAGTt GACUGACA m7b Created HHFKP_12884_cluster-844_11_186

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161958529A>C COSM4763289 pfg043T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5707 taTCAAACGTtcgtc ACGUUUGA m8a Created HHFKP_12884_cluster-844_11_186

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161958516C>T COSM1335716 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4434 ccaggaTTCTCCata AGGAGAAG m6b Created HHFKP_12884_cluster-844_11_186
hsa-miR-4516 ccaggaTTCTCCata GGGAGAAG m6b Created HHFKP_12884_cluster-844_11_186
hsa-miR-4531 ccaggaTTCTCCATa AUGGAGAA m8a Created HHFKP_12884_cluster-844_11_186
hsa-miR-4661-3p ccaGGATCCTccata CAGGAUCC m7b Disrupted HHFKP_12884_cluster-844_11_186
hsa-miR-4802-5p ccaggatCCTCCATa UAUGGAGG m7b Disrupted HHFKP_12884_cluster-844_11_186
hsa-miR-5703 ccaggaTTCTCCata AGGAGAAG m6b Created HHFKP_12884_cluster-844_11_186
hsa-miR-620 ccaggatTCTCCATa AUGGAGAU m7a Created HHFKP_12884_cluster-844_11_186
hsa-miR-6894-5p ccaggATCCTCCata AGGAGGAU m7b Disrupted HHFKP_12884_cluster-844_11_186
hsa-miR-7154-3p ccaggaTCCTCCata AGGAGGAC m6b Disrupted HHFKP_12884_cluster-844_11_186
hsa-miR-766-5p ccaggaTCCTCCata AGGAGGAA m6b Disrupted HHFKP_12884_cluster-844_11_186

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161958507C>A COSM3934210 ESCC-237T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-1-5p tgatggAAACCAGga GCUGGUUU m7b Created HHFKP_12884_cluster-844_11_186
hsa-miR-29b-2-5p tgatgGAAACCAGga CUGGUUUC m8a Created HHFKP_12884_cluster-844_11_186
hsa-miR-3912-5p tgATGGACAccagga AUGUCCAU m7b (m7b->m6b) HHFKP_12884_cluster-844_11_186
hsa-miR-4456 tgatggaCACCAGGa CCUGGUGG m7a Disrupted HHFKP_12884_cluster-844_11_186
hsa-miR-7978 tgatggACACCAGga UCUGGUGU m7b Disrupted HHFKP_12884_cluster-844_11_186

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161958491A>G COSM352847 LUAD_E00522 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4645-3p cagattgACTGTCag AGACAGUA m6b Disrupted HHFKP_12884_cluster-844_11_186

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161870076T>C COSN4709224 PD3945a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4766-5p gcaCTTTCAGAtgta UCUGAAAG m8a Created HPCB1_1359_G1728.1_161839857
hsa-miR-526b-3p GCACTTTCagatgta GAAAGUGC m8a Created HPCB1_1359_G1728.1_161839857

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161860258G>T COSM898619 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-2-5p atacacaGAAACCAc CUGGUUUC m7b Disrupted HHFCT_13025_cluster-844_5_82
hsa-miR-4652-3p atacACAGAAaccac GUUCUGUU m6b Disrupted HHFCT_13025_cluster-844_5_82
hsa-miR-511-3p aTACACATaaaccac AAUGUGUA m7b Created HHFCT_13025_cluster-844_5_82

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161851768G>A COSM1295374 TCGA-FD-A3B8-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-22-5p gctaactGAAGAACc AGUUCUUC m7b Disrupted HHFKP_12879_cluster-844_6_47
hsa-miR-935 gcTAACTGaagaacc CCAGUUAC m6b Disrupted HHFKP_12879_cluster-844_6_47
hsa-miR-22-5p gctaactGAAGAACc AGUUCUUC m7b Disrupted HHHNE_1420_ATF6|NM_007348|exon_CDS|-6.28458051138708|0.183176704113711
hsa-miR-935 gcTAACTGaagaacc CCAGUUAC m6b Disrupted HHHNE_1420_ATF6|NM_007348|exon_CDS|-6.28458051138708|0.183176704113711
hsa-miR-22-5p gctaactGAAGAACc AGUUCUUC m7b Disrupted HHHSE_1420_ATF6|NM_007348|exon_CDS|-6.28458051138708|0.183176704113711
hsa-miR-935 gcTAACTGaagaacc CCAGUUAC m6b Disrupted HHHSE_1420_ATF6|NM_007348|exon_CDS|-6.28458051138708|0.183176704113711

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161851746C>CA COSM1472893 TCGA-C8-A26X-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3140-3p caaatgaCAAAAGCcc AGCUUUUG m7b Created HHFKP_12879_cluster-844_6_47
hsa-miR-616-3p caAATGACaaagccc AGUCAUUG m6b Disrupted HHFKP_12879_cluster-844_6_47
hsa-miR-3140-3p caaatgaCAAAAGCcc AGCUUUUG m7b Created HHHNE_1420_ATF6|NM_007348|exon_CDS|-6.28458051138708|0.183176704113711
hsa-miR-616-3p caAATGACaaagccc AGUCAUUG m6b Disrupted HHHNE_1420_ATF6|NM_007348|exon_CDS|-6.28458051138708|0.183176704113711
hsa-miR-3140-3p caaatgaCAAAAGCcc AGCUUUUG m7b Created HHHSE_1420_ATF6|NM_007348|exon_CDS|-6.28458051138708|0.183176704113711
hsa-miR-616-3p caAATGACaaagccc AGUCAUUG m6b Disrupted HHHSE_1420_ATF6|NM_007348|exon_CDS|-6.28458051138708|0.183176704113711

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161846566G>C COSM898618 TCGA-BK-A0C9-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1299 ttaTCCAGAAaaaca UUCUGGAA m7a Disrupted HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-2113 ttatcCACAAAaaca AUUUGUGC m6b Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-3691-5p ttATCCACaaaaaca AGUGGAUG m6b Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-376b-5p tTATCCACaaaaaca CGUGGAUA m7b Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-376c-5p tTATCCACaaaaaca GGUGGAUA m7b Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-4752 ttATCCACAAaaaca UUGUGGAU m8a Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-4782-5p ttATCCAGAAaaaca UUCUGGAU m8a Disrupted HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-5010-3p ttatcCACAAAAaca UUUUGUGU m7a Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-516b-5p ttaTCCAGAaaaaca AUCUGGAG m6b Disrupted HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-5706 ttATCCAGAAaaaca UUCUGGAU m8a Disrupted HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-6833-5p ttaTCCACAaaaaca GUGUGGAA m6b Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-6839-5p ttATCCAGAaaaaca UCUGGAUU m7a (m7a->m6a) HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-8056 ttATCCACaaaaaca CGUGGAUU m6b Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161846561A>T COSM3369385 TCGA-BJ-A0ZA-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1261 tggtaTTATCCAgaa AUGGAUAA m7b Disrupted HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-1299 tggtattTTCCAGAa UUCUGGAA m7b Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-369-3p tgGTATTATccagaa AAUAAUAC m7b (m7b->m6b) HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-378j tggtattATCCAGaa ACUGGAUU m6b Disrupted HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-4782-5p tggtattATCCAGAa UUCUGGAU m7b Disrupted HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-5706 tggtattATCCAGAa UUCUGGAU m7b Disrupted HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-6124 tggtaTTTTCCagaa GGGAAAAG m6b Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-6128 tggtattTTCCAGaa ACUGGAAU m6b Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-6839-5p tggtattATCCAGAa UCUGGAUU m7a Disrupted HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516
hsa-miR-875-3p tggtatTTTCCAGaa CCUGGAAA m7b Created HHKTA_39379_NM_007348|1333|1372|1.94705734732907|0.6744870645516

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161846479C>T COSM3477346 TCGA-GN-A267-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-3p gaatgAACCCTagtg GAGGGUUG m6b Disrupted HPRO6_3289_G3806.1_161816277
hsa-miR-664a-3p gAATGAATcctagtg UAUUCAUU m7b Created HPRO6_3289_G3806.1_161816277

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser