SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0015031
Gene Symbol: ATF6
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.161814373G>T COSN8646149 AOCS-149-1-7 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3065-5p ctcttTTTGTTGttc UCAACAAA m7b Created HHFKP_12878_cluster-844_5_20
hsa-miR-3529-3p ctctttTTGTTGTTc AACAACAA m8a Created HHFKP_12878_cluster-844_5_20

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161802264G>A COSM1240866 ESO-0292 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203b-3p aaatgtCAGTTCAga UUGAACUG m7b Created HPRO6_3288_G3805.1_161772048
hsa-miR-4539 aaatgtcAGTTCAGa GCUGAACU m7b Created HPRO6_3288_G3805.1_161772048
hsa-miR-6719-3p aaATGTCAGttcaga UCUGACAU m7b (m6b->m7b) HPRO6_3288_G3805.1_161772048
hsa-miR-7158-3p aaatgtcAGTTCAGa CUGAACUA m7a Created HPRO6_3288_G3805.1_161772048
hsa-miR-888-3p aaaTGTCAGTtcaga GACUGACA m7b Created HPRO6_3288_G3805.1_161772048
Mutation Mutation ID Sample Name Cancer Type
chr1:g.161802223C>T COSM4511207 CSCC-7-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.161802149C>T COSM3477345 TCGA-EB-A41A-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4764-3p ggGGAGTTAcacagc UUAACUCC m7b (m6b->m7b) HHFKP_12877_cluster-844_4_522
hsa-miR-6808-3p ggggaGTCACACagc GUGUGACC m7a Disrupted HHFKP_12877_cluster-844_4_522
hsa-miR-6818-5p ggggagTCACACAgc UUGUGUGA m7b Disrupted HHFKP_12877_cluster-844_4_522

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161802141G>A COSM3788985 TCGA-FT-A3EE-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-361-3p tgttgCTGGGGGAgt UCCCCCAG m8a Disrupted HHFKP_12877_cluster-844_4_522
Mutation Mutation ID Sample Name Cancer Type
chr1:g.161802138G>T COSM898610 TCGA-A5-A0GP-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.161802121A>C COSM530322 TCGA-75-5126-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-5p tctgCTCCGCCagtc AGGCGGAG m7b Created HHFKP_12877_cluster-844_4_522
hsa-miR-3064-5p tctgctCAGCCAGtc UCUGGCUG m7b Disrupted HHFKP_12877_cluster-844_4_522
hsa-miR-4663 tctGCTCAGCcagtc AGCUGAGC m7b Disrupted HHFKP_12877_cluster-844_4_522
hsa-miR-4730 tctgcTCCGCCAGtc CUGGCGGA m8a Created HHFKP_12877_cluster-844_4_522
hsa-miR-6081 tCTGCTCCgccagtc AGGAGCAG m7b Created HHFKP_12877_cluster-844_4_522
hsa-miR-6504-5p tctgctCAGCCAGtc UCUGGCUG m7b Disrupted HHFKP_12877_cluster-844_4_522
hsa-miR-658 tctgCTCCGCCagtc GGCGGAGG m7a Created HHFKP_12877_cluster-844_4_522
hsa-miR-8077 tctgCTCAGCCagtc GGCUGAGU m7a Disrupted HHFKP_12877_cluster-844_4_522
hsa-miR-892b tctgctcAGCCAGTc CACUGGCU m7b Disrupted HHFKP_12877_cluster-844_4_522

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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