SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0015020
Gene Symbol: ATF6
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.161784059G>A COSM3385358 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-151a-5p tCTCCTCGgtcagtg UCGAGGAG m7b Disrupted HHFKP_12875_cluster-844_2_381
hsa-miR-151b tCTCCTCGgtcagtg UCGAGGAG m7b Disrupted HHFKP_12875_cluster-844_2_381
hsa-miR-3136-5p tctccTCAGTCAGtg CUGACUGA m8a Created HHFKP_12875_cluster-844_2_381
hsa-miR-4439 tctccTCAGTCAgtg GUGACUGA m7b Created HHFKP_12875_cluster-844_2_381
hsa-miR-4513 tctccTCAGTCagtg AGACUGAC m6b Created HHFKP_12875_cluster-844_2_381
hsa-miR-4523 tctcCTCGGTCagtg GACCGAGA m7a Disrupted HHFKP_12875_cluster-844_2_381
hsa-miR-4689 tCTCCTCAgtcagtg UUGAGGAG m7b Created HHFKP_12875_cluster-844_2_381
hsa-miR-4784 TCTCCTCAgtcagtg UGAGGAGA m8a Created HHFKP_12875_cluster-844_2_381
hsa-miR-6855-3p tctccTCAGTCagtg AGACUGAC m6b Created HHFKP_12875_cluster-844_2_381
hsa-miR-6857-3p tctcCTCAGTCAgtg UGACUGAG m8a Created HHFKP_12875_cluster-844_2_381
hsa-miR-151a-5p tCTCCTCGgtcagtg UCGAGGAG m7b Disrupted HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-151b tCTCCTCGgtcagtg UCGAGGAG m7b Disrupted HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-3136-5p tctccTCAGTCAGtg CUGACUGA m8a Created HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4439 tctccTCAGTCAgtg GUGACUGA m7b Created HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4513 tctccTCAGTCagtg AGACUGAC m6b Created HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4523 tctcCTCGGTCagtg GACCGAGA m7a Disrupted HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4689 tCTCCTCAgtcagtg UUGAGGAG m7b Created HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4784 TCTCCTCAgtcagtg UGAGGAGA m8a Created HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-6855-3p tctccTCAGTCagtg AGACUGAC m6b Created HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-6857-3p tctcCTCAGTCAgtg UGACUGAG m8a Created HHRBL_1240_BCBL1-2of3-SCL_7828

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161784058C>T COSM170979 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-151a-5p gtCTCCTCGgtcagt UCGAGGAG m7b (m7b->m6b) HHFKP_12875_cluster-844_2_381
hsa-miR-151b gtCTCCTCGgtcagt UCGAGGAG m7b (m7b->m6b) HHFKP_12875_cluster-844_2_381
hsa-miR-4428 gTCTCCTTGgtcagt CAAGGAGA m8a (m7a->m8a) HHFKP_12875_cluster-844_2_381
hsa-miR-4523 gtctcCTCGGTCagt GACCGAGA m7a Disrupted HHFKP_12875_cluster-844_2_381
hsa-miR-4784 gTCTCCTCggtcagt UGAGGAGA m7b Disrupted HHFKP_12875_cluster-844_2_381
hsa-miR-151a-5p gtCTCCTCGgtcagt UCGAGGAG m7b (m7b->m6b) HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-151b gtCTCCTCGgtcagt UCGAGGAG m7b (m7b->m6b) HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4428 gTCTCCTTGgtcagt CAAGGAGA m8a (m7a->m8a) HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4523 gtctcCTCGGTCagt GACCGAGA m7a Disrupted HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4784 gTCTCCTCggtcagt UGAGGAGA m7b Disrupted HHRBL_1240_BCBL1-2of3-SCL_7828

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161784051G>A COSM4415056 SNUH_G73_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-139-3p cagtctCGTCTCCtc UGGAGACG m7b Disrupted HHFKP_12875_cluster-844_2_381
hsa-miR-143-3p cagtcTCATCTCctc UGAGAUGA m7b Created HHFKP_12875_cluster-844_2_381
hsa-miR-3672 cAGTCTCATctcctc AUGAGACU m8a (m7a->m8a) HHFKP_12875_cluster-844_2_381
hsa-miR-4770 cagtcTCATCTCctc UGAGAUGA m7b Created HHFKP_12875_cluster-844_2_381
hsa-miR-6088 cagtcTCATCTCctc AGAGAUGA m7b Created HHFKP_12875_cluster-844_2_381
hsa-miR-6864-3p cAGTCTCAtctcctc GUGAGACU m7b Created HHFKP_12875_cluster-844_2_381
hsa-miR-6888-5p cagtctcATCTCCTc AAGGAGAU m7b Created HHFKP_12875_cluster-844_2_381
hsa-miR-139-3p cagtctCGTCTCCtc UGGAGACG m7b Disrupted HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-143-3p cagtcTCATCTCctc UGAGAUGA m7b Created HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-3672 cAGTCTCATctcctc AUGAGACU m8a (m7a->m8a) HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4770 cagtcTCATCTCctc UGAGAUGA m7b Created HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-6088 cagtcTCATCTCctc AGAGAUGA m7b Created HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-6864-3p cAGTCTCAtctcctc GUGAGACU m7b Created HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-6888-5p cagtctcATCTCCTc AAGGAGAU m7b Created HHRBL_1240_BCBL1-2of3-SCL_7828

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161784046G>T COSM331132 LUAD-B00416 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4427 tTATTCAGtctcgtc UCUGAAUA m7b Disrupted HHFKP_12875_cluster-844_2_381
hsa-miR-4499 ttatTCAGTCTcgtc AAGACUGA m7b Disrupted HHFKP_12875_cluster-844_2_381
hsa-miR-873-3p ttattCAGTCTCgtc GGAGACUG m7b Disrupted HHFKP_12875_cluster-844_2_381
hsa-miR-4427 tTATTCAGtctcgtc UCUGAAUA m7b Disrupted HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4499 ttatTCAGTCTcgtc AAGACUGA m7b Disrupted HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-873-3p ttattCAGTCTCgtc GGAGACUG m7b Disrupted HHRBL_1240_BCBL1-2of3-SCL_7828
hsa-miR-4427 tTATTCAGtctcgtc UCUGAAUA m7b Disrupted HPSEF_826_G994.1_161753829
hsa-miR-4499 ttatTCAGTCTcgtc AAGACUGA m7b Disrupted HPSEF_826_G994.1_161753829
hsa-miR-873-3p ttattCAGTCTCgtc GGAGACUG m7b Disrupted HPSEF_826_G994.1_161753829

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161781999G>T COSM898605 TCGA-B5-A0JR-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4666a-5p ctgtACATGTAatta AUACAUGU m7b Created HPCB3_767_G1069.1_161751777
hsa-miR-486-5p ctGTACAGGtaatta UCCUGUAC m7b (m7b->m6b) HPCB3_767_G1069.1_161751777

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161781995T>C COSM898604 TCGA-D1-A17A-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-2-3p aaatCTGTACAGgta CUGUACAG m8a Disrupted HPCB3_767_G1069.1_161751777
hsa-let-7g-3p aaatCTGTACAGgta CUGUACAG m8a Disrupted HPCB3_767_G1069.1_161751777
hsa-miR-143-5p aaatCTGCACaggta GGUGCAGU m6b Created HPCB3_767_G1069.1_161751777
hsa-miR-1914-5p aaatctGCACAGGta CCCUGUGC m7b Created HPCB3_767_G1069.1_161751777
hsa-miR-486-5p aaatctGTACAGGta UCCUGUAC m7b Disrupted HPCB3_767_G1069.1_161751777

Mutation Mutation ID Sample Name Cancer Type
chr1:g.161781987C>T COSM530325 TCGA-05-4398-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-494-5p caACAACCaaatctg AGGUUGUC m6b Disrupted HPCB3_767_G1069.1_161751777
hsa-miR-5002-5p caacaACCAAATctg AAUUUGGU m7b Disrupted HPCB3_767_G1069.1_161751777
hsa-miR-659-3p caacAACCAAatctg CUUGGUUC m6b Disrupted HPCB3_767_G1069.1_161751777

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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