SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0020249
Gene Symbol: ATE1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.121913867C>T COSM4482477 CSCC-44-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-605-3p caGCCTTCaaaatct AGAAGGCA m6b Disrupted HPCB1_6437_G8011.1_123673389
hsa-miR-6126 caGCCTTCAaaatct GUGAAGGC m7b (m7b->m6b) HPCB1_6437_G8011.1_123673389
hsa-miR-6768-3p caGCCTTTaaaatct CAAAGGCC m6b Created HPCB1_6437_G8011.1_123673389
hsa-miR-6864-5p cagCCTTCAAaatct UUGAAGGG m7a Disrupted HPCB1_6437_G8011.1_123673389
hsa-miR-605-3p caGCCTTCaaaatct AGAAGGCA m6b Disrupted HPCB1_6437_G8011.1_123673389
hsa-miR-6126 caGCCTTCAaaatct GUGAAGGC m7b (m7b->m6b) HPCB1_6437_G8011.1_123673389
hsa-miR-6768-3p caGCCTTTaaaatct CAAAGGCC m6b Created HPCB1_6437_G8011.1_123673389
hsa-miR-6864-5p cagCCTTCAAaatct UUGAAGGG m7a Disrupted HPCB1_6437_G8011.1_123673389

Mutation Mutation ID Sample Name Cancer Type
chr10:g.121913859C>G COSM415142 TCGA-DK-A1AB-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3655 aaaatctGACAAGaa GCUUGUCG m6b Created HPCB1_6437_G8011.1_123673389
hsa-miR-5186 aaAATCTCacaagaa AGAGAUUG m6b Disrupted HPCB1_6437_G8011.1_123673389
hsa-miR-581 aaaatctCACAAGAa UCUUGUGU m7a Disrupted HPCB1_6437_G8011.1_123673389
hsa-miR-10b-3p aaAATCTGacaagaa ACAGAUUC m6b Created HPCB1_6437_G8011.1_123673389
hsa-miR-3655 aaaatctGACAAGaa GCUUGUCG m6b Created HPCB1_6437_G8011.1_123673389
hsa-miR-5186 aaAATCTCacaagaa AGAGAUUG m6b Disrupted HPCB1_6437_G8011.1_123673389
hsa-miR-581 aaaatctCACAAGAa UCUUGUGU m7a Disrupted HPCB1_6437_G8011.1_123673389

Mutation Mutation ID Sample Name Cancer Type
chr10:g.121902537C>T COSM3716700 SS6003133 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-152-5p aatgcagCAGAACCc AGGUUCUG m7b Disrupted HPRO6_13388_G15541.1_123662050
hsa-miR-182-3p aatgcagTAGAACCc UGGUUCUA m7b Created HPRO6_13388_G15541.1_123662050
hsa-miR-20a-3p AATGCAGTagaaccc ACUGCAUU m8a Created HPRO6_13388_G15541.1_123662050
hsa-miR-217 aATGCAGTAgaaccc UACUGCAU m8a (m7a->m8a) HPRO6_13388_G15541.1_123662050
hsa-miR-3692-5p aatgCAGCAGaaccc CCUGCUGG m6b Disrupted HPRO6_13388_G15541.1_123662050
hsa-miR-4418 aaTGCAGTagaaccc CACUGCAG m6b Created HPRO6_13388_G15541.1_123662050
hsa-miR-6071 aatgCAGCAGAAccc UUCUGCUG m8a Disrupted HPRO6_13388_G15541.1_123662050
hsa-miR-6807-3p aATGCAGTagaaccc CACUGCAU m7b Created HPRO6_13388_G15541.1_123662050
hsa-miR-6828-3p aatgcAGCAGAaccc AUCUGCUC m6b Disrupted HPRO6_13388_G15541.1_123662050
hsa-miR-93-3p aatgCAGCAGaaccc ACUGCUGA m6b Disrupted HPRO6_13388_G15541.1_123662050
hsa-miR-152-5p aatgcagCAGAACCc AGGUUCUG m7b Disrupted HPRO6_13388_G15541.1_123662050
hsa-miR-182-3p aatgcagTAGAACCc UGGUUCUA m7b Created HPRO6_13388_G15541.1_123662050
hsa-miR-20a-3p AATGCAGTagaaccc ACUGCAUU m8a Created HPRO6_13388_G15541.1_123662050
hsa-miR-217 aATGCAGTAgaaccc UACUGCAU m8a (m7a->m8a) HPRO6_13388_G15541.1_123662050
hsa-miR-3692-5p aatgCAGCAGaaccc CCUGCUGG m6b Disrupted HPRO6_13388_G15541.1_123662050
hsa-miR-4418 aaTGCAGTagaaccc CACUGCAG m6b Created HPRO6_13388_G15541.1_123662050
hsa-miR-6071 aatgCAGCAGAAccc UUCUGCUG m8a Disrupted HPRO6_13388_G15541.1_123662050
hsa-miR-6807-3p aATGCAGTagaaccc CACUGCAU m7b Created HPRO6_13388_G15541.1_123662050
hsa-miR-6828-3p aatgcAGCAGAaccc AUCUGCUC m6b Disrupted HPRO6_13388_G15541.1_123662050
hsa-miR-93-3p aatgCAGCAGaaccc ACUGCUGA m6b Disrupted HPRO6_13388_G15541.1_123662050

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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