SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_006407
Gene Symbol: ARL6IP5
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.69104624A>G COSM1048279 TCGA-D1-A167-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6837-3p tcagcaaAGTGAAGg CCUUCACU m7b Disrupted HHFCT_110969_uc003dnr.1_5_21
hsa-miR-6754-3p tcagcaaGGTGAAGg UCUUCACC m7b Created HHFCT_110969_uc003dnr.1_5_21
hsa-miR-412-3p tcagcaaGGTGAAGg ACUUCACC m7b Created HHFCT_110969_uc003dnr.1_5_21
hsa-miR-3200-3p tcaGCAAGGTGaagg CACCUUGC m8a Created HHFCT_110969_uc003dnr.1_5_21
hsa-miR-6837-3p tcagcaaAGTGAAGg CCUUCACU m7b Disrupted HHFKP_102971_uc003dnr.1_6_132
hsa-miR-6754-3p tcagcaaGGTGAAGg UCUUCACC m7b Created HHFKP_102971_uc003dnr.1_6_132
hsa-miR-412-3p tcagcaaGGTGAAGg ACUUCACC m7b Created HHFKP_102971_uc003dnr.1_6_132
hsa-miR-3200-3p tcaGCAAGGTGaagg CACCUUGC m8a Created HHFKP_102971_uc003dnr.1_6_132

Mutation Mutation ID Sample Name Cancer Type
chr3:g.69104620G>A COSM1425203 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8075 tatATCAGCAaagtg UGCUGAUG m7a Disrupted HHFKP_102971_uc003dnr.1_6_132
hsa-miR-628-5p tataTCAGCAaagtg AUGCUGAC m6b Disrupted HHFCT_110969_uc003dnr.1_5_21
hsa-miR-653-5p tataTCAACAaagtg GUGUUGAA m6b Created HHFCT_110969_uc003dnr.1_5_21
hsa-miR-8075 tatATCAGCAaagtg UGCUGAUG m7a Disrupted HHFCT_110969_uc003dnr.1_5_21
hsa-miR-653-5p tataTCAACAaagtg GUGUUGAA m6b Created HHFKP_102971_uc003dnr.1_6_132
hsa-miR-628-5p tataTCAGCAaagtg AUGCUGAC m6b Disrupted HHFKP_102971_uc003dnr.1_6_132

Mutation Mutation ID Sample Name Cancer Type
chr3:g.69104552G>A COSM3597248 TCGA-ER-A19D-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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