SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0018452
Gene Symbol: ARID5B
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr10:g.62000196C>T COSM3375579 PCSI_0062_Pa_X [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr10:g.62000185T>C COSM919363 TCGA-AX-A060-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2392 agCCATCCTccattc UAGGAUGG m7b (m6b->m7b) HPTA4_420_G1965.1_63759939
hsa-miR-4662b agCCATCTTccattc AAAGAUGG m7b (m7b->m6b) HPTA4_420_G1965.1_63759939
hsa-miR-4647 agCCATCTTCcattc GAAGAUGG m8a Disrupted HPTA4_420_G1965.1_63759939
hsa-miR-4426 agCCATCTTCcattc GAAGAUGG m8a Disrupted HPTA4_420_G1965.1_63759939
hsa-miR-3605-5p agcCATCCTCcattc UGAGGAUG m7b Created HPTA4_420_G1965.1_63759939
hsa-miR-6894-5p agccATCCTCCattc AGGAGGAU m7b Created HPTA4_420_G1965.1_63759939
hsa-miR-766-5p agccaTCCTCCattc AGGAGGAA m6b Created HPTA4_420_G1965.1_63759939
hsa-miR-7154-3p agccaTCCTCCattc AGGAGGAC m6b Created HPTA4_420_G1965.1_63759939
hsa-miR-4802-5p agccatCCTCCATtc UAUGGAGG m7b Created HPTA4_420_G1965.1_63759939
hsa-miR-6077 agccaTCTTCCattc GGGAAGAG m6b Disrupted HPTA4_420_G1965.1_63759939

Mutation Mutation ID Sample Name Cancer Type
chr10:g.61940347G>A COSM2158009 CCK81 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5002-3p agtacaGGCAGTCAa UGACUGCC m8a Disrupted HHKTA_40780_NM_032199|461|500|1.90378940627731|0.162054822400235
hsa-miR-3120-5p agtaCAGACAGtcaa CCUGUCUG m7b Created HHKTA_40780_NM_032199|461|500|1.90378940627731|0.162054822400235
hsa-miR-943 agtacagACAGTCAa CUGACUGU m7b Created HHKTA_40780_NM_032199|461|500|1.90378940627731|0.162054822400235
hsa-miR-6811-3p agtACAGGCagtcaa AGCCUGUG m6b Disrupted HHKTA_40780_NM_032199|461|500|1.90378940627731|0.162054822400235
hsa-miR-6514-3p agtACAGGCAGtcaa CUGCCUGU m8a Disrupted HHKTA_40780_NM_032199|461|500|1.90378940627731|0.162054822400235

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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