SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0078413
Gene Symbol: ARID1B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.157084850T>C COSM343090 LUAD-S00484 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1343-5p ttgGCTCCCCtgtag UGGGGAGC m7b Created HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-4433a-3p ttggctCTCCTGTag ACAGGAGU m7a Disrupted HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-4700-3p ttggctcTCCTGTag CACAGGAC m6b Disrupted HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-4768-3p ttggcTCTCCTGtag CCAGGAGA m7b Disrupted HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-505-5p tTGGCTCCCctgtag GGGAGCCA m8a (m7a->m8a) HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-6827-5p ttGGCTCCCctgtag UGGGAGCC m7b (m6b->m7b) HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-939-5p ttgGCTCCCCtgtag UGGGGAGC m7b Created HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-1343-5p ttgGCTCCCCtgtag UGGGGAGC m7b Created HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-4433a-3p ttggctCTCCTGTag ACAGGAGU m7a Disrupted HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-4700-3p ttggctcTCCTGTag CACAGGAC m6b Disrupted HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-4768-3p ttggcTCTCCTGtag CCAGGAGA m7b Disrupted HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-505-5p tTGGCTCCCctgtag GGGAGCCA m8a (m7a->m8a) HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-6827-5p ttGGCTCCCctgtag UGGGAGCC m7b (m6b->m7b) HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-939-5p ttgGCTCCCCtgtag UGGGGAGC m7b Created HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498

Mutation Mutation ID Sample Name Cancer Type
chr6:g.157084839C>T COSM4817227 TCGA-IR-A3LK-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4768-3p tcccTCTCCTGttgg CCAGGAGA m7b Disrupted HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-5197-3p tccCTCTTCTgttgg AAGAAGAG m7b Created HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-4768-3p tcccTCTCCTGttgg CCAGGAGA m7b Disrupted HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-5197-3p tccCTCTTCTgttgg AAGAAGAG m7b Created HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-4768-3p tcccTCTCCTGttgg CCAGGAGA m7b Disrupted HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-5197-3p tccCTCTTCTgttgg AAGAAGAG m7b Created HHHNE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-4768-3p tcccTCTCCTGttgg CCAGGAGA m7b Disrupted HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498
hsa-miR-5197-3p tccCTCTTCTgttgg AAGAAGAG m7b Created HHHSE_1197_ARID1B|NM_017519|exon_CDS|-6.72794465717747|1.23620738136498

Mutation Mutation ID Sample Name Cancer Type
chr6:g.157084787C>T COSM4394219 TCGA-EE-A3JD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-185-5p cttTCTCTCCAcatg UGGAGAGA m8a Created HHFKP_128771_cluster-19572_30_8
hsa-miR-299-3p ctttctcCCCACATg UAUGUGGG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-3150a-3p ctttCTCCCCAcatg CUGGGGAG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-3151-5p ctttctCCCCACatg GGUGGGGC m6b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-3175 cttTCTCCCCacatg CGGGGAGA m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-4306 cttTCTCTCCAcatg UGGAGAGA m8a Created HHFKP_128771_cluster-19572_30_8
hsa-miR-4447 ctttctCCCCACatg GGUGGGGG m6b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-4472 ctttctCCCCACatg GGUGGGGG m6b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-4491 ctttctcTCCACATg AAUGUGGA m7b Created HHFKP_128771_cluster-19572_30_8
hsa-miR-4644 cttTCTCTCCAcatg UGGAGAGA m8a Created HHFKP_128771_cluster-19572_30_8
hsa-miR-4657 ctttctcTCCACATg AAUGUGGA m7b Created HHFKP_128771_cluster-19572_30_8
hsa-miR-491-5p ctttcTCCCCACatg AGUGGGGA m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-5192 ctttCTCTCCacatg AGGAGAGU m6b Created HHFKP_128771_cluster-19572_30_8
hsa-miR-6742-5p ctttctCCCCACatg AGUGGGGU m6b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-6763-5p ctttCTCCCCAcatg CUGGGGAG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-6796-5p ctttctCCCCACAtg UUGUGGGG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-6878-5p ctTTCTCCCcacatg AGGGAGAA m7b (m7b->m6b) HHFKP_128771_cluster-19572_30_8
hsa-miR-7847-3p ctttctCTCCACatg CGUGGAGG m6b Created HHFKP_128771_cluster-19572_30_8
hsa-miR-185-5p cttTCTCTCCAcatg UGGAGAGA m8a Created HHFKP_128771_cluster-19572_30_8
hsa-miR-299-3p ctttctcCCCACATg UAUGUGGG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-3150a-3p ctttCTCCCCAcatg CUGGGGAG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-3151-5p ctttctCCCCACatg GGUGGGGC m6b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-3175 cttTCTCCCCacatg CGGGGAGA m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-4306 cttTCTCTCCAcatg UGGAGAGA m8a Created HHFKP_128771_cluster-19572_30_8
hsa-miR-4447 ctttctCCCCACatg GGUGGGGG m6b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-4472 ctttctCCCCACatg GGUGGGGG m6b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-4491 ctttctcTCCACATg AAUGUGGA m7b Created HHFKP_128771_cluster-19572_30_8
hsa-miR-4644 cttTCTCTCCAcatg UGGAGAGA m8a Created HHFKP_128771_cluster-19572_30_8
hsa-miR-4657 ctttctcTCCACATg AAUGUGGA m7b Created HHFKP_128771_cluster-19572_30_8
hsa-miR-491-5p ctttcTCCCCACatg AGUGGGGA m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-5192 ctttCTCTCCacatg AGGAGAGU m6b Created HHFKP_128771_cluster-19572_30_8
hsa-miR-6742-5p ctttctCCCCACatg AGUGGGGU m6b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-6763-5p ctttCTCCCCAcatg CUGGGGAG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-6796-5p ctttctCCCCACAtg UUGUGGGG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-6878-5p ctTTCTCCCcacatg AGGGAGAA m7b (m7b->m6b) HHFKP_128771_cluster-19572_30_8
hsa-miR-7847-3p ctttctCTCCACatg CGUGGAGG m6b Created HHFKP_128771_cluster-19572_30_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.157084778G>A COSM3781612 8015299 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-134-5p cgCAGTCACctttct UGUGACUG m7b (m6b->m7b) HHFKP_128771_cluster-19572_30_8
hsa-miR-3118 cgCAGTCACctttct UGUGACUG m7b (m6b->m7b) HHFKP_128771_cluster-19572_30_8
hsa-miR-4484 cgcagtCGCCTTTct AAAAGGCG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-6730-5p cgcagtcACCTTTCt AGAAAGGU m7b Created HHFKP_128771_cluster-19572_30_8
hsa-miR-134-5p cgCAGTCACctttct UGUGACUG m7b (m6b->m7b) HHFKP_128771_cluster-19572_30_8
hsa-miR-3118 cgCAGTCACctttct UGUGACUG m7b (m6b->m7b) HHFKP_128771_cluster-19572_30_8
hsa-miR-4484 cgcagtCGCCTTTct AAAAGGCG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-6730-5p cgcagtcACCTTTCt AGAAAGGU m7b Created HHFKP_128771_cluster-19572_30_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.157084773C>T COSM1634598 RK004_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3195 cCCGGCGCagtcgcc CGCGCCGG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-3195 cCCGGCGCagtcgcc CGCGCCGG m7b Disrupted HHFKP_128771_cluster-19572_30_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.157084771C>T COSM1441812 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181d-3p aaCCCGGTGcagtcg CCACCGGG m7b (m6b->m7b) HHFKP_128771_cluster-19572_30_8
hsa-miR-3130-3p aacccGGTGCAGtcg GCUGCACC m7b Created HHFKP_128771_cluster-19572_30_8
hsa-miR-3195 aacCCGGCGCagtcg CGCGCCGG m7b Disrupted HHFKP_128771_cluster-19572_30_8
hsa-miR-181d-3p aaCCCGGTGcagtcg CCACCGGG m7b (m6b->m7b) HHFKP_128771_cluster-19572_30_8
hsa-miR-3130-3p aacccGGTGCAGtcg GCUGCACC m7b Created HHFKP_128771_cluster-19572_30_8
hsa-miR-3195 aacCCGGCGCagtcg CGCGCCGG m7b Disrupted HHFKP_128771_cluster-19572_30_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.157084726G>T COSM4663243 T3024 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p gcagtCATTGCAtcc CUGCAAUG m7b Created HHFCT_140415_cluster-19572_66_8
hsa-miR-106a-3p gcagtCATTGCAtcc CUGCAAUG m7b Created HHFCT_140415_cluster-19572_66_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.157084694G>A COSM4663241 T3351 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-134-3p tcCCCACAGGaacgg CCUGUGGG m8a Created HHFCT_140414_cluster-19572_65_6
hsa-miR-1914-5p tcccCACAGGaacgg CCCUGUGC m6b Created HHFCT_140414_cluster-19572_65_6
hsa-miR-6796-5p tCCCCACAggaacgg UUGUGGGG m7b Created HHFCT_140414_cluster-19572_65_6
hsa-miR-7152-5p tccccACAGGAAcgg UUUCCUGU m7b Created HHFCT_140414_cluster-19572_65_6
hsa-miR-134-3p tcCCCACAGGaacgg CCUGUGGG m8a Created HHFCT_140414_cluster-19572_65_6
hsa-miR-1914-5p tcccCACAGGaacgg CCCUGUGC m6b Created HHFCT_140414_cluster-19572_65_6
hsa-miR-6796-5p tCCCCACAggaacgg UUGUGGGG m7b Created HHFCT_140414_cluster-19572_65_6
hsa-miR-7152-5p tccccACAGGAAcgg UUUCCUGU m7b Created HHFCT_140414_cluster-19572_65_6

Mutation Mutation ID Sample Name Cancer Type
chr6:g.157084689C>T COSM3622265 TCGA-EE-A29L-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3150a-3p tgacCTCCCCAcggg CUGGGGAG m7b Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-3175 tgacCTCCCCacggg CGGGGAGA m6b Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-491-5p tgaccTCCCCACggg AGUGGGGA m7b Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-5192 tgacCTCTCCacggg AGGAGAGU m6b Created HHFCT_140414_cluster-19572_65_6
hsa-miR-6763-5p tgacCTCCCCAcggg CUGGGGAG m7b Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-6799-5p tgACCTCCCCacggg GGGGAGGU m8a Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-6825-5p tgaCCTCCCCAcggg UGGGGAGG m8a Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-3150a-3p tgacCTCCCCAcggg CUGGGGAG m7b Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-3175 tgacCTCCCCacggg CGGGGAGA m6b Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-491-5p tgaccTCCCCACggg AGUGGGGA m7b Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-5192 tgacCTCTCCacggg AGGAGAGU m6b Created HHFCT_140414_cluster-19572_65_6
hsa-miR-6763-5p tgacCTCCCCAcggg CUGGGGAG m7b Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-6799-5p tgACCTCCCCacggg GGGGAGGU m8a Disrupted HHFCT_140414_cluster-19572_65_6
hsa-miR-6825-5p tgaCCTCCCCAcggg UGGGGAGG m8a Disrupted HHFCT_140414_cluster-19572_65_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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