SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_018125
Gene Symbol: ARHGEF10L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.17573707G>A COSN4745220 tumor_4108101 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3144-5p cccaggGGTCCCCTc AGGGGACC m8a Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-331-3p cCCAGGGGtcccctc GCCCCUGG m7b Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-4713-3p cccagGGATCCCctc UGGGAUCC m7b Created HHFCT_8878_cluster-156_22_15
hsa-miR-6846-3p cccAGGGGTCccctc UGACCCCU m7b Disrupted HHFCT_8878_cluster-156_22_15

Mutation Mutation ID Sample Name Cancer Type
chr1:g.17573701C>G COSN6430761 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-5p acaGCCCCCaggggt CGGGGGCG m6b Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-185-3p aCAGCCCCcaggggt AGGGGCUG m7b Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-331-3p acagcccCCAGGGGt GCCCCUGG m7b Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-4292 acagccCCCAGGGGt CCCCUGGG m8a Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-4488 acaGCCCCCaggggt AGGGGGCG m6b Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-4675 ACAGCCCCcaggggt GGGGCUGU m8a Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-4697-5p acaGCCCCCaggggt AGGGGGCG m6b Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-4734 acagCCCGCAGgggt GCUGCGGG m7b Created HHFCT_8878_cluster-156_22_15
hsa-miR-4741 ACAGCCCGcaggggt CGGGCUGU m8a Created HHFCT_8878_cluster-156_22_15
hsa-miR-4767 acaGCCCGCaggggt CGCGGGCG m6b Created HHFCT_8878_cluster-156_22_15
hsa-miR-637 acagCCCCCAGgggt ACUGGGGG m7b Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-6791-5p acagccCCCAGGGGt CCCCUGGG m8a Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-6801-3p acagcccGCAGGGGt ACCCCUGC m7b Created HHFCT_8878_cluster-156_22_15
hsa-miR-6810-3p acagcccGCAGGGGt UCCCCUGC m7b Created HHFCT_8878_cluster-156_22_15
hsa-miR-6846-5p acAGCCCCCAggggt UGGGGGCU m8a Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-6848-5p acAGCCCCCAggggt UGGGGGCU m8a Disrupted HHFCT_8878_cluster-156_22_15
hsa-miR-6852-5p acagcCCCCAGGGgt CCCUGGGG m8a Disrupted HHFCT_8878_cluster-156_22_15

Mutation Mutation ID Sample Name Cancer Type
chr1:g.17565566C>T COSN7186775 8015858 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27a-5p agggAAGCCCagctg AGGGCUUA m6b Disrupted HHFKP_8695_cluster-156_9_8
hsa-miR-378a-3p agggaAGTCCAGctg ACUGGACU m7b Created HHFKP_8695_cluster-156_9_8
hsa-miR-378b agggaAGTCCAGctg ACUGGACU m7b Created HHFKP_8695_cluster-156_9_8
hsa-miR-378c agggaAGTCCAGctg ACUGGACU m7b Created HHFKP_8695_cluster-156_9_8
hsa-miR-378d agggaAGTCCAGctg ACUGGACU m7b Created HHFKP_8695_cluster-156_9_8
hsa-miR-378e agggaAGTCCAGctg ACUGGACU m7b Created HHFKP_8695_cluster-156_9_8
hsa-miR-378f agggaAGTCCAGctg ACUGGACU m7b Created HHFKP_8695_cluster-156_9_8
hsa-miR-378g agggaAGCCCAGctg ACUGGGCU m7b Disrupted HHFKP_8695_cluster-156_9_8
hsa-miR-378h agggaAGTCCAGctg ACUGGACU m7b Created HHFKP_8695_cluster-156_9_8
hsa-miR-378i agggaAGTCCAGctg ACUGGACU m7b Created HHFKP_8695_cluster-156_9_8
hsa-miR-422a agggaAGTCCAGctg ACUGGACU m7b Created HHFKP_8695_cluster-156_9_8
hsa-miR-5009-5p agggAAGTCCAgctg UUGGACUU m7b Created HHFKP_8695_cluster-156_9_8
hsa-miR-617 agGGAAGTCcagctg AGACUUCC m7b (m6b->m7b) HHFKP_8695_cluster-156_9_8
hsa-miR-8058 agggAAGTCCAGctg CUGGACUU m8a Created HHFKP_8695_cluster-156_9_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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