SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_015230
Gene Symbol: ARAP2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.36177912G>A COSM3392851 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5092 gagaaatGTGGATat AAUCCACG m6b Disrupted HHHNE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-7151-5p gagaaatATGGATat GAUCCAUC m6b Created HHHNE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-5092 gagaaatGTGGATat AAUCCACG m6b Disrupted HHHSE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-7151-5p gagaaatATGGATat GAUCCAUC m6b Created HHHSE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669

Mutation Mutation ID Sample Name Cancer Type
chr4:g.36177894G>A COSM3917714 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6819-3p gaattgAGAGGCTat AAGCCUCU m7b Disrupted HHHNE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-6877-3p gaattgAGAGGCTat CAGCCUCU m7b Disrupted HHHNE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-6819-3p gaattgAGAGGCTat AAGCCUCU m7b Disrupted HHHSE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-6877-3p gaattgAGAGGCTat CAGCCUCU m7b Disrupted HHHSE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669

Mutation Mutation ID Sample Name Cancer Type
chr4:g.36177888A>T COSM3940865 ESCC-158T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3651 agaGGCTATaaggca CAUAGCCC m6b Disrupted HHHNE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-6819-3p AGAGGCTTtaaggca AAGCCUCU m8a Created HHHNE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-7109-3p aGAGGCTTtaaggca CAAGCCUC m7b Created HHHNE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-9-3p agagGCTTTAaggca AUAAAGCU m6b Created HHHNE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-3651 agaGGCTATaaggca CAUAGCCC m6b Disrupted HHHSE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-6819-3p AGAGGCTTtaaggca AAGCCUCU m8a Created HHHSE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-7109-3p aGAGGCTTtaaggca CAAGCCUC m7b Created HHHSE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669
hsa-miR-9-3p agagGCTTTAaggca AUAAAGCU m6b Created HHHSE_1059_ARAP2|NM_015230|exon_CDS|-5.81628159211145|-1.28573438683669

Mutation Mutation ID Sample Name Cancer Type
chr4:g.36167008A>C COSM4135751 AOCS-166-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-153-3p tcCTATGCAtgtagc UUGCAUAG m7b (m6b->m7b) HHFCT_114242_cluster-17544_13_20
hsa-miR-181a-5p tcctaTGAATGTagc AACAUUCA m7b Disrupted HHFCT_114242_cluster-17544_13_20
hsa-miR-181b-5p tcctaTGAATGTagc AACAUUCA m7b Disrupted HHFCT_114242_cluster-17544_13_20
hsa-miR-181c-5p tcctaTGAATGTagc AACAUUCA m7b Disrupted HHFCT_114242_cluster-17544_13_20
hsa-miR-181d-5p tcctaTGAATGTagc AACAUUCA m7b Disrupted HHFCT_114242_cluster-17544_13_20
hsa-miR-376a-3p tcCTATGAatgtagc AUCAUAGA m6b Disrupted HHFCT_114242_cluster-17544_13_20
hsa-miR-376b-3p tcCTATGAatgtagc AUCAUAGA m6b Disrupted HHFCT_114242_cluster-17544_13_20
hsa-miR-4262 tcctaTGAATGTagc GACAUUCA m7b Disrupted HHFCT_114242_cluster-17544_13_20
hsa-miR-153-3p tcCTATGCAtgtagc UUGCAUAG m7b (m6b->m7b) HHFKP_106290_cluster-17544_12_25
hsa-miR-181a-5p tcctaTGAATGTagc AACAUUCA m7b Disrupted HHFKP_106290_cluster-17544_12_25
hsa-miR-181b-5p tcctaTGAATGTagc AACAUUCA m7b Disrupted HHFKP_106290_cluster-17544_12_25
hsa-miR-181c-5p tcctaTGAATGTagc AACAUUCA m7b Disrupted HHFKP_106290_cluster-17544_12_25
hsa-miR-181d-5p tcctaTGAATGTagc AACAUUCA m7b Disrupted HHFKP_106290_cluster-17544_12_25
hsa-miR-376a-3p tcCTATGAatgtagc AUCAUAGA m6b Disrupted HHFKP_106290_cluster-17544_12_25
hsa-miR-376b-3p tcCTATGAatgtagc AUCAUAGA m6b Disrupted HHFKP_106290_cluster-17544_12_25
hsa-miR-4262 tcctaTGAATGTagc GACAUUCA m7b Disrupted HHFKP_106290_cluster-17544_12_25

Mutation Mutation ID Sample Name Cancer Type
chr4:g.36166980G>A COSM4398689 TCGA-ER-A19W-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-133a-3p gtGGACCAAActgtg UUUGGUCC m8a Created HHFCT_114242_cluster-17544_13_20
hsa-miR-133b gtGGACCAAActgtg UUUGGUCC m8a Created HHFCT_114242_cluster-17544_13_20
hsa-miR-4746-5p gtGGACCGaactgtg CCGGUCCC m6b Disrupted HHFCT_114242_cluster-17544_13_20
hsa-miR-133a-3p gtGGACCAAActgtg UUUGGUCC m8a Created HHFKP_106290_cluster-17544_12_25
hsa-miR-133b gtGGACCAAActgtg UUUGGUCC m8a Created HHFKP_106290_cluster-17544_12_25
hsa-miR-4746-5p gtGGACCGaactgtg CCGGUCCC m6b Disrupted HHFKP_106290_cluster-17544_12_25

Mutation Mutation ID Sample Name Cancer Type
chr4:g.36116690G>C COSN6829415 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1178-3p atGTGAGCAttcaat UUGCUCAC m7b (m6b->m7b) HHFKP_106288_cluster-17544_10_21

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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