SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NR_036576
Gene Symbol: APTX
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr9:g.32984648C>T COSM243009 P03-2345 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p gctaCCATGCCattc AGGCAUGG m7b Created HPRO6_77441_G92872.1_32984643
hsa-miR-4536-5p gCTACCACgccattc UGUGGUAG m7b Disrupted HPRO6_77441_G92872.1_32984643
hsa-miR-5197-5p gctaccaTGCCATTc CAAUGGCA m7b Created HPRO6_77441_G92872.1_32984643

Mutation Mutation ID Sample Name Cancer Type
chr9:g.32974547TTCA>A COSM1462036 TCGA-CK-5916-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4426 gtaCATCTTCatgtgatc GAAGAUGG m7a Disrupted HPRO6_77439_G92870.1_32974541
hsa-miR-4647 gtaCATCTTCatgtgatc GAAGAUGG m7a Disrupted HPRO6_77439_G92870.1_32974541
hsa-miR-4699-5p gtacATCTTCatgtgatc AGAAGAUU m6b Disrupted HPRO6_77439_G92870.1_32974541
hsa-miR-8060 gtacatCTTCATGtgatc CCAUGAAG m7b Disrupted HPRO6_77439_G92870.1_32974541
hsa-miR-4426 gtaCATCTTCatgtgatc GAAGAUGG m7a Disrupted HPRO6_77439_G92870.1_32974541
hsa-miR-4647 gtaCATCTTCatgtgatc GAAGAUGG m7a Disrupted HPRO6_77439_G92870.1_32974541
hsa-miR-4699-5p gtacATCTTCatgtgatc AGAAGAUU m6b Disrupted HPRO6_77439_G92870.1_32974541
hsa-miR-8060 gtacatCTTCATGtgatc CCAUGAAG m7b Disrupted HPRO6_77439_G92870.1_32974541

Mutation Mutation ID Sample Name Cancer Type
chr9:g.32973536C>G COSM4832933 TCGA-IR-A3LH-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1207-3p cattcctCAGCTGAa UCAGCUGG m7a Disrupted HPRO6_77438_G92869.1_32973534
hsa-miR-3664-3p catTCCTGAGctgaa UCUCAGGA m7b Created HPRO6_77438_G92869.1_32973534
hsa-miR-3915 caTTCCTCAgctgaa UUGAGGAA m7b (m7b->m6b) HPRO6_77438_G92869.1_32973534
hsa-miR-3928-3p caTTCCTCagctgaa GGAGGAAC m6b Disrupted HPRO6_77438_G92869.1_32973534
hsa-miR-3934-3p cattCCTGAGCtgaa UGCUCAGG m7b Created HPRO6_77438_G92869.1_32973534
hsa-miR-6736-3p cattcctGAGCTGAa UCAGCUCC m7a Created HPRO6_77438_G92869.1_32973534
hsa-miR-6854-5p cattcCTGAGCTgaa AAGCUCAG m7b Created HPRO6_77438_G92869.1_32973534
hsa-miR-7160-5p cattCCTCAGCtgaa UGCUGAGG m7b Disrupted HPRO6_77438_G92869.1_32973534
hsa-miR-873-5p caTTCCTGagctgaa GCAGGAAC m6b Created HPRO6_77438_G92869.1_32973534

Mutation Mutation ID Sample Name Cancer Type
chr9:g.32973527G>A COSM1183292 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2116-5p gctgaAAGAACatct GGUUCUUA m6b Disrupted HPRO6_77438_G92869.1_32973534
hsa-miR-22-5p gctgaAAGAACatct AGUUCUUC m6b Disrupted HPRO6_77438_G92869.1_32973534
hsa-miR-30a-3p gCTGAAAGaacatct CUUUCAGU m7a Disrupted HPRO6_77438_G92869.1_32973534
hsa-miR-30d-3p gCTGAAAGaacatct CUUUCAGU m7a Disrupted HPRO6_77438_G92869.1_32973534
hsa-miR-30e-3p gCTGAAAGaacatct CUUUCAGU m7a Disrupted HPRO6_77438_G92869.1_32973534
hsa-miR-335-3p gcTGAAAAAacatct UUUUUCAU m7a (m6a->m7a) HPRO6_77438_G92869.1_32973534
hsa-miR-4307 gctgaaAAAACATct AAUGUUUU m7b Created HPRO6_77438_G92869.1_32973534
hsa-miR-4677-5p gctgaAAGAACAtct UUGUUCUU m7b Disrupted HPRO6_77438_G92869.1_32973534

Mutation Mutation ID Sample Name Cancer Type
chr9:g.32973392T>A COSN9710692 AOCS-139-12-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4307 tAAAACATgcagctt AAUGUUUU m7b Disrupted HHFKP_144423_cluster-23200_3_12
hsa-miR-4666b taaaACATGCAgctt UUGCAUGU m7b Disrupted HHFKP_144423_cluster-23200_3_12
hsa-miR-4307 tAAAACATgcagctt AAUGUUUU m7b Disrupted HPCB1_41922_G53591.2_32973398
hsa-miR-4666b taaaACATGCAgctt UUGCAUGU m7b Disrupted HPCB1_41922_G53591.2_32973398
hsa-miR-4307 tAAAACATgcagctt AAUGUUUU m7b Disrupted HPCB3_24273_G33371.1_32973404
hsa-miR-4666b taaaACATGCAgctt UUGCAUGU m7b Disrupted HPCB3_24273_G33371.1_32973404
hsa-miR-4307 tAAAACATgcagctt AAUGUUUU m7b Disrupted HPRO6_77437_G92868.1_32973396
hsa-miR-4666b taaaACATGCAgctt UUGCAUGU m7b Disrupted HPRO6_77437_G92868.1_32973396

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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