SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0000521
Gene Symbol: APEX1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.20456825C>T COSM182624 TCGA-AA-3562-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1908-5p ctgctttCCCGCCag CGGCGGGG m6b Disrupted HHFKP_44763_cluster-6301_2_94
hsa-miR-25-5p ctgctttTCCGCCag AGGCGGAG m6b Created HHFKP_44763_cluster-6301_2_94
hsa-miR-3153 ctgCTTTCCCgccag GGGGAAAG m7b Disrupted HHFKP_44763_cluster-6301_2_94
hsa-miR-4730 ctgctttTCCGCCAg CUGGCGGA m7b Created HHFKP_44763_cluster-6301_2_94
hsa-miR-6124 ctgCTTTTCCgccag GGGAAAAG m7b Created HHFKP_44763_cluster-6301_2_94
hsa-miR-663a ctgctttCCCGCCag AGGCGGGG m6b Disrupted HHFKP_44763_cluster-6301_2_94
hsa-miR-6733-5p ctgCTTTCCCgccag UGGGAAAG m7b Disrupted HHFKP_44763_cluster-6301_2_94
hsa-miR-6739-5p ctgCTTTCCCgccag UGGGAAAG m7b Disrupted HHFKP_44763_cluster-6301_2_94

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20456812G>A COSM2029130 CHEWS024 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6872-3p cagtGGCATGGGcct CCCAUGCC m8a Created HHFKP_44763_cluster-6301_2_94
hsa-miR-4641 cagtggCATGGGCct UGCCCAUG m7b Created HHFKP_44763_cluster-6301_2_94

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20456811C>T COSM954252 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4252 aCAGTGGCgtgggcc GGCCACUG m7b Disrupted HHFKP_44763_cluster-6301_2_94

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20456810G>A COSM268676 TCGA-AA-3715-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4252 taCAGTGGCgtgggc GGCCACUG m7b (m7b->m6b) HHFKP_44763_cluster-6301_2_94
hsa-miR-662 tacagtgACGTGGGc UCCCACGU m7b Created HHFKP_44763_cluster-6301_2_94

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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