SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0025915
Gene Symbol: ADAMTS20
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.43454043C>T COSM1361600 TCGA-DM-A1DB-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-337-5p ttGCCGTTatgggct GAACGGCU m6b Created HPCB1_10129_G12683.1_43847838
hsa-miR-4641 ttgccgtCATGGGCt UGCCCAUG m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-548al TTGCCGTTatgggct AACGGCAA m8a Created HPCB1_10129_G12683.1_43847838
hsa-miR-337-5p ttGCCGTTatgggct GAACGGCU m6b Created HPCB1_10129_G12683.1_43847838
hsa-miR-4641 ttgccgtCATGGGCt UGCCCAUG m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-548al TTGCCGTTatgggct AACGGCAA m8a Created HPCB1_10129_G12683.1_43847838

Mutation Mutation ID Sample Name Cancer Type
chr12:g.43454042A>C COSM4947168 TCGA-13-0890-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4641 tgccgtCATGGGCta UGCCCAUG m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-6840-3p tgccgTCCTGGGCta GCCCAGGA m8a Created HPCB1_10129_G12683.1_43847838
hsa-miR-4641 tgccgtCATGGGCta UGCCCAUG m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-6840-3p tgccgTCCTGGGCta GCCCAGGA m8a Created HPCB1_10129_G12683.1_43847838
hsa-miR-4641 tgccgtCATGGGCta UGCCCAUG m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-6840-3p tgccgTCCTGGGCta GCCCAGGA m8a Created HPCB1_10129_G12683.1_43847838

Mutation Mutation ID Sample Name Cancer Type
chr12:g.43454039G>A COSM3460795 TCGA-EE-A29M-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103b cgtcatgGGCTATGt UCAUAGCC m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-3651 cgtcatGGGCTATGt CAUAGCCC m8a Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-4641 cgtCATGGGCtatgt UGCCCAUG m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-6847-3p cgtCATGAGCtatgt GGCUCAUG m7b Created HPCB1_10129_G12683.1_43847838
hsa-miR-6854-5p cgtcaTGAGCTatgt AAGCUCAG m6b Created HPCB1_10129_G12683.1_43847838
hsa-miR-7705 cgtcatGAGCTATgt AAUAGCUC m7b Created HPCB1_10129_G12683.1_43847838
hsa-miR-103b cgtcatgGGCTATGt UCAUAGCC m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-3651 cgtcatGGGCTATGt CAUAGCCC m8a Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-4641 cgtCATGGGCtatgt UGCCCAUG m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-6847-3p cgtCATGAGCtatgt GGCUCAUG m7b Created HPCB1_10129_G12683.1_43847838
hsa-miR-6854-5p cgtcaTGAGCTatgt AAGCUCAG m6b Created HPCB1_10129_G12683.1_43847838
hsa-miR-7705 cgtcatGAGCTATgt AAUAGCUC m7b Created HPCB1_10129_G12683.1_43847838
hsa-miR-103b cgtcatgGGCTATGt UCAUAGCC m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-3651 cgtcatGGGCTATGt CAUAGCCC m8a Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-4641 cgtCATGGGCtatgt UGCCCAUG m7b Disrupted HPCB1_10129_G12683.1_43847838
hsa-miR-6847-3p cgtCATGAGCtatgt GGCUCAUG m7b Created HPCB1_10129_G12683.1_43847838
hsa-miR-6854-5p cgtcaTGAGCTatgt AAGCUCAG m6b Created HPCB1_10129_G12683.1_43847838
hsa-miR-7705 cgtcatGAGCTATgt AAUAGCUC m7b Created HPCB1_10129_G12683.1_43847838

Mutation Mutation ID Sample Name Cancer Type
chr12:g.43434291C>A COSM1511858 TCGA-86-6851-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3688-5p cTTGCCACTtccatc AGUGGCAA m8a (m8a->m7a) HPCB3_5560_G7608.1_43828094
hsa-miR-4795-5p cttgCCACTTCcatc AGAAGUGG m7b Disrupted HPCB3_5560_G7608.1_43828094
hsa-miR-182-5p cTTGCCAAttccatc UUUGGCAA m7b Created HPCB3_5560_G7608.1_43828094
hsa-miR-3688-5p cTTGCCACTtccatc AGUGGCAA m8a (m8a->m7a) HPCB3_5560_G7608.1_43828094
hsa-miR-4795-5p cttgCCACTTCcatc AGAAGUGG m7b Disrupted HPCB3_5560_G7608.1_43828094

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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