SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0028301
Gene Symbol: ACAD10
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.111749241C>T COSM3456116 TCGA-D3-A5GS-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3157-5p cccTGGCTGAggctt UUCAGCCA m7b Created HHFCT_39133_cluster-5180_5_8
hsa-miR-4691-3p cccTGGCTGaggctt CCAGCCAC m6b Created HHFCT_39133_cluster-5180_5_8
hsa-miR-6858-3p ccCTGGCTGaggctt CAGCCAGC m7a (m6a->m7a) HHFCT_39133_cluster-5180_5_8

Mutation Mutation ID Sample Name Cancer Type
chr12:g.111749235C>T COSM3456115 TCGA-EE-A29E-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4685-5p cctggGCCCTGGccg CCCAGGGC m7b Disrupted HHFCT_39133_cluster-5180_5_8
hsa-miR-6837-5p cctggGCCCTGGccg ACCAGGGC m7b Disrupted HHFCT_39133_cluster-5180_5_8
hsa-miR-7160-3p cctGGGCCCTGgccg CAGGGCCC m8a Disrupted HHFCT_39133_cluster-5180_5_8
hsa-miR-3918 cctgGGCCCTGgccg ACAGGGCC m7b Disrupted HHFCT_39133_cluster-5180_5_8

Mutation Mutation ID Sample Name Cancer Type
chr12:g.111749232G>T COSM272299 TCGA-AA-3966-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4700-3p gGTCCTGTGccctgg CACAGGAC m8a (m7a->m8a) HHFCT_39133_cluster-5180_5_8
hsa-miR-3918 ggtcctgGGCCCTGg ACAGGGCC m7b Disrupted HHFCT_39133_cluster-5180_5_8
hsa-miR-7160-3p ggtcctGGGCCCTGg CAGGGCCC m8a Disrupted HHFCT_39133_cluster-5180_5_8
hsa-miR-6840-3p ggTCCTGGGCcctgg GCCCAGGA m8a Disrupted HHFCT_39133_cluster-5180_5_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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