SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0030578
Gene Symbol: ABCC4
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.95083177TG>G COSM1368037 TCGA-CM-4743-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3613-3p taTTTTTTGgaaacgt ACAAAAAA m7b (m7b->m6b) HHFKP_39808_cluster-6227_27_8
hsa-miR-3613-3p taTTTTTTGgaaacgt ACAAAAAA m7b (m7b->m6b) HHFKP_39808_cluster-6227_27_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.95083154G>T COSM401437 LUAD-5V8LT [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-28-5p gtgaAGCTCCTggaa AAGGAGCU m7b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-3139 gtgaAGCTCCTggaa UAGGAGCU m7b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-4459 gtgaagCTCCTGGaa CCAGGAGG m7a Created HHFKP_39808_cluster-6227_27_8
hsa-miR-4645-5p gtgaagcGCCTGGaa ACCAGGCA m6b Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-4673 gtgaagcGCCTGGAa UCCAGGCA m7a Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-4768-3p gtgaagCTCCTGGaa CCAGGAGA m7a Created HHFKP_39808_cluster-6227_27_8
hsa-miR-665 gtgaagCTCCTGGaa ACCAGGAG m7b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-708-5p gtgaAGCTCCTggaa AAGGAGCU m7b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-28-5p gtgaAGCTCCTggaa AAGGAGCU m7b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-3139 gtgaAGCTCCTggaa UAGGAGCU m7b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-4459 gtgaagCTCCTGGaa CCAGGAGG m7a Created HHFKP_39808_cluster-6227_27_8
hsa-miR-4645-5p gtgaagcGCCTGGaa ACCAGGCA m6b Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-4673 gtgaagcGCCTGGAa UCCAGGCA m7a Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-4768-3p gtgaagCTCCTGGaa CCAGGAGA m7a Created HHFKP_39808_cluster-6227_27_8
hsa-miR-665 gtgaagCTCCTGGaa ACCAGGAG m7b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-708-5p gtgaAGCTCCTggaa AAGGAGCU m7b Created HHFKP_39808_cluster-6227_27_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.95083145C>G COSM552038 TCGA-49-4486-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-2-3p ctggaaTGTACAagt CUGUACAG m6b Created HHFKP_39808_cluster-6227_27_8
hsa-let-7c-3p ctggaaTGTACAagt CUGUACAA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-let-7g-3p ctggaaTGTACAagt CUGUACAG m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-181a-5p ctgGAATGTacaagt AACAUUCA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-181b-5p ctgGAATGTacaagt AACAUUCA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-181c-5p ctgGAATGTacaagt AACAUUCA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-181d-5p ctgGAATGTacaagt AACAUUCA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-3674 ctggaaTCTACAAgt AUUGUAGA m7b Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-376a-2-5p ctggAATCTACaagt GGUAGAUU m7b Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-376a-5p ctgGAATCTACaagt GUAGAUUC m8a Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-3935 ctggaATCTACAagt UGUAGAUA m7a Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-4262 ctgGAATGTacaagt GACAUUCA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-493-5p ctggaATGTACAAgt UUGUACAU m8a Created HHFKP_39808_cluster-6227_27_8
hsa-let-7a-2-3p ctggaaTGTACAagt CUGUACAG m6b Created HHFKP_39808_cluster-6227_27_8
hsa-let-7c-3p ctggaaTGTACAagt CUGUACAA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-let-7g-3p ctggaaTGTACAagt CUGUACAG m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-181a-5p ctgGAATGTacaagt AACAUUCA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-181b-5p ctgGAATGTacaagt AACAUUCA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-181c-5p ctgGAATGTacaagt AACAUUCA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-181d-5p ctgGAATGTacaagt AACAUUCA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-3674 ctggaaTCTACAAgt AUUGUAGA m7b Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-376a-2-5p ctggAATCTACaagt GGUAGAUU m7b Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-376a-5p ctgGAATCTACaagt GUAGAUUC m8a Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-3935 ctggaATCTACAagt UGUAGAUA m7a Disrupted HHFKP_39808_cluster-6227_27_8
hsa-miR-4262 ctgGAATGTacaagt GACAUUCA m6b Created HHFKP_39808_cluster-6227_27_8
hsa-miR-493-5p ctggaATGTACAAgt UUGUACAU m8a Created HHFKP_39808_cluster-6227_27_8

Mutation Mutation ID Sample Name Cancer Type
chr13:g.95075506T>C COSM3814151 TCGA-AC-A3W5-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1225-3p caGGGGCTCtggacc UGAGCCCC m7b (m7b->m6b) HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-198 caggggcTCTGGACc GGUCCAGA m7b Disrupted HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-210-5p CAGGGGCTctggacc AGCCCCUG m8a Disrupted HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-296-5p caGGGGCCCTggacc AGGGCCCC m8a Created HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-3918 caggGGCCCTGgacc ACAGGGCC m7b Created HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-4685-5p cagggGCCCTGGacc CCCAGGGC m7b Created HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-520a-5p caggggCTCTGGAcc CUCCAGAG m7b Disrupted HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-525-5p caggggCTCTGGAcc CUCCAGAG m7b Disrupted HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-6501-3p cagggGCTCTGGacc CCAGAGCA m7a Disrupted HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-6769a-3p cAGGGGCTCtggacc GAGCCCCU m8a (m8a->m7a) HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-6837-5p cagggGCCCTGGacc ACCAGGGC m7b Created HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-7160-3p cagGGGCCCTGgacc CAGGGCCC m8a Created HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-1225-3p caGGGGCTCtggacc UGAGCCCC m7b (m7b->m6b) HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-198 caggggcTCTGGACc GGUCCAGA m7b Disrupted HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-210-5p CAGGGGCTctggacc AGCCCCUG m8a Disrupted HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-296-5p caGGGGCCCTggacc AGGGCCCC m8a Created HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-3918 caggGGCCCTGgacc ACAGGGCC m7b Created HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-4685-5p cagggGCCCTGGacc CCCAGGGC m7b Created HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-520a-5p caggggCTCTGGAcc CUCCAGAG m7b Disrupted HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-525-5p caggggCTCTGGAcc CUCCAGAG m7b Disrupted HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-6501-3p cagggGCTCTGGacc CCAGAGCA m7a Disrupted HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-6769a-3p cAGGGGCTCtggacc GAGCCCCU m8a (m8a->m7a) HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-6837-5p cagggGCCCTGGacc ACCAGGGC m7b Created HHRBC_3836_BC3-2of3-SCL_3005
hsa-miR-7160-3p cagGGGCCCTGgacc CAGGGCCC m8a Created HHRBC_3836_BC3-2of3-SCL_3005

Mutation Mutation ID Sample Name Cancer Type
chr13:g.95073259C>T COSM1181346 587342 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-5p GCCCTCACgctcatg GUGAGGGC m8a Disrupted HHFCT_41103_cluster-6227_40_12

Mutation Mutation ID Sample Name Cancer Type
chr13:g.95073236T>G COSM3885555 TCGA-FS-A1ZW-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-2-3p TCAGTGGTgtgttcg ACCACUGA m8a Disrupted HHFCT_41103_cluster-6227_40_12
hsa-miR-329-3p tcagtGGTGTGTTcg AACACACC m8a Disrupted HHFCT_41103_cluster-6227_40_12
hsa-miR-362-3p tcagtGGTGTGTTcg AACACACC m8a Disrupted HHFCT_41103_cluster-6227_40_12
hsa-miR-4286 tcAGTGGGGTgttcg ACCCCACU m8a Created HHFCT_41103_cluster-6227_40_12
hsa-miR-181a-2-3p TCAGTGGTgtgttcg ACCACUGA m8a Disrupted HHFCT_41103_cluster-6227_40_12
hsa-miR-329-3p tcagtGGTGTGTTcg AACACACC m8a Disrupted HHFCT_41103_cluster-6227_40_12
hsa-miR-362-3p tcagtGGTGTGTTcg AACACACC m8a Disrupted HHFCT_41103_cluster-6227_40_12
hsa-miR-4286 tcAGTGGGGTgttcg ACCCCACU m8a Created HHFCT_41103_cluster-6227_40_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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