SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0030576
Gene Symbol: ABCC4
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.95053140C>T COSM1514424 TCGA-69-7765-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr13:g.95053138T>G COSM3399464 TCGA-87-5896-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4441 gaTCCCTGTaatgag ACAGGGAG m7a (m6a->m7a) HPRO6_23802_G27896.1_95705380
hsa-miR-6504-3p gatccCTGTAATGag CAUUACAG m8a Created HPRO6_23802_G27896.1_95705380
hsa-miR-7151-3p gatcCCTGTAatgag CUACAGGC m6b Created HPRO6_23802_G27896.1_95705380
hsa-miR-4441 gaTCCCTGTaatgag ACAGGGAG m7a (m6a->m7a) HPRO6_23802_G27896.1_95705380
hsa-miR-6504-3p gatccCTGTAATGag CAUUACAG m8a Created HPRO6_23802_G27896.1_95705380
hsa-miR-7151-3p gatcCCTGTAatgag CUACAGGC m6b Created HPRO6_23802_G27896.1_95705380

Mutation Mutation ID Sample Name Cancer Type
chr13:g.95053126C>G COSM3943282 AOCS-139-19-0 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-188-5p gagcacAGGGATGag CAUCCCUU m7a Created HPRO6_23802_G27896.1_95705380
hsa-miR-1914-5p gaGCACAGGGatgag CCCUGUGC m8a Created HPRO6_23802_G27896.1_95705380
hsa-miR-4800-3p gagcacACGGATGag CAUCCGUC m7a Disrupted HPRO6_23802_G27896.1_95705380
hsa-miR-5008-3p gAGCACAGGgatgag CCUGUGCU m8a (m7a->m8a) HPRO6_23802_G27896.1_95705380
hsa-miR-188-5p gagcacAGGGATGag CAUCCCUU m7a Created HPRO6_23802_G27896.1_95705380
hsa-miR-1914-5p gaGCACAGGGatgag CCCUGUGC m8a Created HPRO6_23802_G27896.1_95705380
hsa-miR-4800-3p gagcacACGGATGag CAUCCGUC m7a Disrupted HPRO6_23802_G27896.1_95705380
hsa-miR-5008-3p gAGCACAGGgatgag CCUGUGCU m8a (m7a->m8a) HPRO6_23802_G27896.1_95705380

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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