SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000927
Gene Symbol: ABCB1
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.87570209A>G COSM1092639 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10a-5p caatgatACAGGGTt UACCCUGU m7b Disrupted HPRO6_72342_G86412.1_87199525
hsa-miR-10b-5p caatgatACAGGGTt UACCCUGU m7b Disrupted HPRO6_72342_G86412.1_87199525

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87570206G>T COSM1550432 TCGA-78-7158-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10a-5p tgatACAGGGTtctt UACCCUGU m7b Disrupted HPRO6_72342_G86412.1_87199525
hsa-miR-10b-5p tgatACAGGGTtctt UACCCUGU m7b Disrupted HPRO6_72342_G86412.1_87199525
hsa-miR-6732-3p tgataCAGGGTTctt UAACCCUG m7b Disrupted HPRO6_72342_G86412.1_87199525

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87570206G>C COSM1187346 LC_C4 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10a-5p tgatACAGGGTtctt UACCCUGU m7b Disrupted HPRO6_72342_G86412.1_87199525
hsa-miR-10b-5p tgatACAGGGTtctt UACCCUGU m7b Disrupted HPRO6_72342_G86412.1_87199525
hsa-miR-6732-3p tgataCAGGGTTctt UAACCCUG m7b Disrupted HPRO6_72342_G86412.1_87199525

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87570202T>A COSM1550433 TCGA-55-6969-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 acagggTTCTTCatg AGAAGAAG m6b Disrupted HPRO6_72342_G86412.1_87199525
hsa-miR-4511 acaggGTTCTTCatg GAAGAACU m7a Disrupted HPRO6_72342_G86412.1_87199525
hsa-miR-548ao-5p acagggTACTTCatg AGAAGUAA m6b Created HPRO6_72342_G86412.1_87199525
hsa-miR-548ax acagggTACTTCatg AGAAGUAA m6b Created HPRO6_72342_G86412.1_87199525
hsa-miR-548b-3p acagGGTTCTTcatg CAAGAACC m7b Disrupted HPRO6_72342_G86412.1_87199525
hsa-miR-5585-5p acaggGTACTTCAtg UGAAGUAC m8a Created HPRO6_72342_G86412.1_87199525
hsa-miR-6732-3p aCAGGGTTcttcatg UAACCCUG m7b Disrupted HPRO6_72342_G86412.1_87199525

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87566959G>A COSM3641935 TCGA-EE-A29D-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273g-3p tattaCAGTGGaatt ACCACUGC m6b Disrupted HPSLC_18447_G21956.1_87196268
hsa-miR-181a-2-3p tattaCAGTGGaatt ACCACUGA m6b Disrupted HPSLC_18447_G21956.1_87196268
hsa-miR-2054 TATTACAGtggaatt CUGUAAUA m8a Disrupted HPSLC_18447_G21956.1_87196268
hsa-miR-4436b-5p tattacAGTGGAatt GUCCACUU m6b Disrupted HPSLC_18447_G21956.1_87196268
hsa-miR-6509-3p tattaCAGTGGAAtt UUCCACUG m8a Disrupted HPSLC_18447_G21956.1_87196268

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87550481G>A COSM1452590 TCGA-AQ-A54N-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p ccatctCAAAAAGaa CUUUUUGC m7a Created HHFCT_143284_cluster-21497_1_8
hsa-miR-627-3p ccatctcGAAAAGAa UCUUUUCU m7a Disrupted HHFCT_143284_cluster-21497_1_8
hsa-miR-8055 ccatCTCAAAaagaa CUUUGAGC m6b Created HHFCT_143284_cluster-21497_1_8

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87550476G>T COSM3431822 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-627-3p tcGAAAAGAagttaa UCUUUUCU m7a (m7a->m6a) HHFCT_143284_cluster-21497_1_8

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87536504G>A COSM3883058 TCGA-BR-8372-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3925-3p accACTGGAGcattg ACUCCAGU m7b Disrupted HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139
hsa-miR-3977 accacTGAAGCAttg GUGCUUCA m7b Created HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139
hsa-miR-4276 acCACTGAagcattg CUCAGUGA m6b Created HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87536487C>A COSM3950900 J30_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6717-5p taccaggATCGCCaa AGGCGAUG m6b Created HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139
hsa-miR-8053 taccaggATCGCCAa UGGCGAUU m7a Created HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87536485C>T COSM3032656 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-182-5p ccaggcTTGCCAAtg UUUGGCAA m7b Created HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139
hsa-miR-31-5p ccaggCTTGCCaatg AGGCAAGA m6b Created HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139
hsa-miR-6809-5p ccaggCTTGCCAatg UGGCAAGG m7a Created HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87536484G>A COSM1452580 TCGA-D5-6927-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4710 caggCTCACCaatga GGGUGAGG m6b Created HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139
hsa-miR-4792 cagGCTCACCaatga CGGUGAGC m7b Created HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139
hsa-miR-7855-5p caggCTCACCAAtga UUGGUGAG m8a Created HHKTA_29689_NM_000927|2850|2889|2.50954058100191|0.236928873493139

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87531403T>G COSM3883056 TCGA-F1-A448-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p ctaacaCTGTTACtc UGUAACAG m7b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-451a ctaacACGGTTactc AAACCGUU m6b Created HHFKP_131422_cluster-21497_3_19
hsa-miR-802 ctaacacTGTTACTc CAGUAACA m7b Disrupted HHFKP_131422_cluster-21497_3_19

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87531402G>A COSM1550442 TCGA-55-7907-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p taacaCTGTTACtct UGUAACAG m7b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-633 taacACTATTActct CUAAUAGU m7b Created HHFKP_131422_cluster-21497_3_19
hsa-miR-802 taacacTGTTACTct CAGUAACA m7b Disrupted HHFKP_131422_cluster-21497_3_19

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87531389A>T COSM4434097 436 [oesophagus][lower_third][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p cttaGCATTTGtacc UCAAAUGC m7b Created HHFKP_131422_cluster-21497_3_19
hsa-miR-302f cttAGCAATTgtacc UAAUUGCU m7b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-7849-3p cttagCAATTGTacc GACAAUUG m7b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-7853-5p cttaGCATTTGtacc UCAAAUGC m7b Created HHFKP_131422_cluster-21497_3_19

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87531388T>A COSM3698572 TCGA-G4-6302-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302f ttAGCAATTgtaccc UAAUUGCU m7b (m7b->m6b) HHFKP_131422_cluster-21497_3_19
hsa-miR-7849-3p ttagCAATTGTaccc GACAAUUG m7b Disrupted HHFKP_131422_cluster-21497_3_19

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87531364G>T COSM1092606 TCGA-AX-A05Z-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1976 ataGCAGGAGttgtt CCUCCUGC m7b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-370-3p atAGCAGGagttgtt GCCUGCUG m6b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-606 atagcAGTAGTTgtt AAACUACU m7b Created HHFKP_131422_cluster-21497_3_19
hsa-miR-6893-3p atAGCAGGagttgtt CCCUGCUG m6b Disrupted HHFKP_131422_cluster-21497_3_19

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87506037A>T COSM308752 S00945 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-130b-3p gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-16-2-3p gaAATATTGcactaa CCAAUAUU m7b (m6b->m7b) HHFKP_131420_cluster-21497_1_34
hsa-miR-195-3p gaAATATTGcactaa CCAAUAUU m7b (m6b->m7b) HHFKP_131420_cluster-21497_1_34
hsa-miR-301a-3p gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-301b-3p gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-3666 gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-4295 gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-4473 gaaatatAGCACTAa CUAGUGCU m7b Disrupted HHFKP_131420_cluster-21497_1_34
hsa-miR-454-3p gaaataTTGCACTAa UAGUGCAA m8a Created HHFKP_131420_cluster-21497_1_34
hsa-miR-4671-3p gaaatatTGCACTAa UUAGUGCA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-512-3p gaaatatAGCACTaa AAGUGCUG m6b Disrupted HHFKP_131420_cluster-21497_1_34
hsa-miR-520f-3p gaaatatAGCACTaa AAGUGCUU m6b Disrupted HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87506015G>A COSM1698850 YUAKER [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3121-5p gaCAAAGGAactcag UCCUUUGC m7a (m7a->m6a) HHFKP_131420_cluster-21497_1_34
hsa-miR-6844 gACAAAGAAactcag UUCUUUGU m8a (m7a->m8a) HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87506010C>T COSM747743 TCGA-66-2785-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3160-3p aggaacTCAGCTCTc AGAGCUGA m8a Disrupted HHFKP_131420_cluster-21497_1_34
hsa-miR-4682 aggAACTCAGctctc UCUGAGUU m7b Disrupted HHFKP_131420_cluster-21497_1_34
hsa-miR-610 aggaacTTAGCTCtc UGAGCUAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-8077 aggaACTCAGCtctc GGCUGAGU m7b Disrupted HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87506000G>T COSM354606 LUAD_E00623 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4701-5p ctctctgGTGGCCAg UUGGCCAC m7b Disrupted HHFKP_131420_cluster-21497_1_34
hsa-miR-548s ctctctgTTGGCCAg AUGGCCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-588 ctctctgGTGGCCAg UUGGCCAC m7b Disrupted HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87505986C>T COSM4489888 CSCC-56-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-33a-5p gaaaCAATGCAttgc GUGCAUUG m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-33b-5p gaaaCAATGCAttgc GUGCAUUG m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-4289 gaaACAATGCattgc GCAUUGUG m7a Created HHFKP_131420_cluster-21497_1_34
hsa-miR-5700 gaaacaATGCATTgc UAAUGCAU m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-586 gaaacAATGCATtgc UAUGCAUU m7b Created HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87505979C>T COSM3641903 TCGA-EE-A2A0-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-425-5p cgcatTGTCATagct AAUGACAC m6b Created HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87505976T>C COSM602545 TCGA-05-4390-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3688-5p aTTGCCACagctcgt AGUGGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-891a-3p atTGCCACagctcgt AGUGGCAC m6b Created HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87505969T>C COSM4570969 CSCC-29-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3178 tagctCGCGCCCttg GGGGCGCG m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-4634 tagcTCGCGCCcttg CGGCGCGA m7b Created HHFKP_131420_cluster-21497_1_34

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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