| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Molecule Type: | mRNA |
|---|---|
| Transcript ID: | NM_005066 |
| Gene Symbol: | SFPQ |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35192710G>A | COSM4901292 | TCGA-GF-A6C9-06 | [skin][NS][malignant_melanoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-615-3p | L2HS-557968_3 | chr1:35192668-35192728 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35192683A>G | COSM1579729 | PGBM13PT | [central_nervous_system][brain][glioma][astrocytoma_Grade_IV] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-615-3p | L2HS-557968_3 | chr1:35192668-35192728 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35191497G>T | COSM366894 | LUAD-F00257 | [lung][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-92b | L2HS-1007069_2 | chr1:35191455-35191503 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35191479C>AC | COSM1578523 | MN-299 | [meninges][NS][meningioma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-92b | L2HS-1007069_2 | chr1:35191455-35191503 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35191471G>T | COSM680964 | TCGA-34-5236-01 | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-92b | L2HS-1007069_2 | chr1:35191455-35191503 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35190814C>T | COSM2080172 | HT115 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-10a | 0727AHS-1324900_1 | chr1:35190742-35190822 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35190751A>C | COSM4939008 | TCGA-FV-A2QR-01 | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-10a | 0727AHS-1324900_1 | chr1:35190742-35190822 | - | ||
| miR-331-3p | A12-277331_21 | chr1:35190746-35190804 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35187079AGGT>T | COSM908656 | TCGA-B5-A11H-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-1229 | L2HS-3336256_1 | chr1:35187037-35187085 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35187066G>C | COSM4399391 | TCGA-BF-A1PZ-01 | [skin][NS][malignant_melanoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-1229 | L2HS-3336256_1 | chr1:35187037-35187085 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35187048G>T | COSM534784 | TCGA-50-5931-01 | [lung][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-1229 | L2HS-3336256_1 | chr1:35187037-35187085 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.35187047G>A | COSM284935 | TCGA-AA-A010-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-1229 | L2HS-3336256_1 | chr1:35187037-35187085 | - | ||