SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Molecule Type: mRNA
Transcript ID: NM_002631
Gene Symbol: PGD
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Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.10419766A>C COSN8308741 TCGA-A8-A0A6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-15b L2HS-877061_2 chr1:10419734-10419790 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10419739A>G COSM3740498 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-15b L2HS-877061_2 chr1:10419734-10419790 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10418898C>A COSM893254 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
let-7e L1HS-181095_5 chr1:10418873-10418926 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10417399C>T COSM3470569 TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-339-5p L1HS-247882_4 chr1:10417375-10417407 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10417396C>T COSM3470568 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-339-5p L1HS-247882_4 chr1:10417375-10417407 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10417112C>T COSM1220278 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-339-5p L1HS-247882_4 chr1:10417095-10417117 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10417112C>A COSM462518 TCGA-CJ-4913-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-339-5p L1HS-247882_4 chr1:10417095-10417117 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10413169C>G COSM1193600 H441 [lung][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-181a L2HS-638067_3 chr1:10413121-10413178 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10413166G>T COSM283972 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-181a L2HS-638067_3 chr1:10413121-10413178 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10413139C>T COSM146395 GC8_T [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-181a L2HS-638067_3 chr1:10413121-10413178 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10413127C>G COSM3801104 TCGA-BH-A2L8-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-181a L2HS-638067_3 chr1:10413121-10413178 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10413122A>G COSM3975790 759_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-181a L2HS-638067_3 chr1:10413121-10413178 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10411490A>T COSM4917215 TCGA-EP-A2KA-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-484 L1-1079352_1 chr1:10411453-10411518 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10411469G>C COSM1294643 TCGA-BL-A3JM-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-484 L1-1079352_1 chr1:10411453-10411518 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10404211A>T COSM4879701 LP6005409-DNA_H01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-3676 L1HS-283925_4 chr1:10404191-10404238 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10404208C>T COSM4713798 T2940 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-3676 L1HS-283925_4 chr1:10404191-10404238 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10404203GGG>GAA COSM225944 ME024T [NS][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-3676 L1HS-283925_4 chr1:10404191-10404238 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.10404197T>G COSM3470562 TCGA-EB-A24D-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-3676 L1HS-283925_4 chr1:10404191-10404238 +



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