SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Molecule Type: | mRNA |
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Transcript ID: | NM_002631 |
Gene Symbol: | PGD |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10419766A>C | COSN8308741 | TCGA-A8-A0A6-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-15b | L2HS-877061_2 | chr1:10419734-10419790 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10419739A>G | COSM3740498 | RK308_C01 | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-15b | L2HS-877061_2 | chr1:10419734-10419790 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10418898C>A | COSM893254 | TCGA-BS-A0UV-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
let-7e | L1HS-181095_5 | chr1:10418873-10418926 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10417399C>T | COSM3470569 | TCGA-EE-A2MR-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-339-5p | L1HS-247882_4 | chr1:10417375-10417407 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10417396C>T | COSM3470568 | TCGA-FW-A3R5-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-339-5p | L1HS-247882_4 | chr1:10417375-10417407 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10417112C>T | COSM1220278 | 587376 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-339-5p | L1HS-247882_4 | chr1:10417095-10417117 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10417112C>A | COSM462518 | TCGA-CJ-4913-01 | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-339-5p | L1HS-247882_4 | chr1:10417095-10417117 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10413169C>G | COSM1193600 | H441 | [lung][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-181a | L2HS-638067_3 | chr1:10413121-10413178 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10413166G>T | COSM283972 | TCGA-AA-A010-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-181a | L2HS-638067_3 | chr1:10413121-10413178 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10413139C>T | COSM146395 | GC8_T | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-181a | L2HS-638067_3 | chr1:10413121-10413178 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10413127C>G | COSM3801104 | TCGA-BH-A2L8-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-181a | L2HS-638067_3 | chr1:10413121-10413178 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10413122A>G | COSM3975790 | 759_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-181a | L2HS-638067_3 | chr1:10413121-10413178 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10411490A>T | COSM4917215 | TCGA-EP-A2KA-01 | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-484 | L1-1079352_1 | chr1:10411453-10411518 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10411469G>C | COSM1294643 | TCGA-BL-A3JM-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-484 | L1-1079352_1 | chr1:10411453-10411518 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10404211A>T | COSM4879701 | LP6005409-DNA_H01 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-3676 | L1HS-283925_4 | chr1:10404191-10404238 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10404208C>T | COSM4713798 | T2940 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-3676 | L1HS-283925_4 | chr1:10404191-10404238 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10404203GGG>GAA | COSM225944 | ME024T | [NS][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-3676 | L1HS-283925_4 | chr1:10404191-10404238 | + |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.10404197T>G | COSM3470562 | TCGA-EB-A24D-01 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-3676 | L1HS-283925_4 | chr1:10404191-10404238 | + |