| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Molecule Type: | mRNA |
|---|---|
| Transcript ID: | NM_001297673 |
| Gene Symbol: | RPRD2 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.150472987A>G | COSM1333805 | TCGA-AA-3663-01 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-24 | TAON-4018721-1_1 | chr1:150472930-150472988 | + | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.150472953C>T | COSM3473406 | TCGA-FS-A1ZK-06 | [skin][NS][malignant_melanoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-24 | TAON-4018721-1_1 | chr1:150472930-150472988 | + | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.150472942C>T | COSM4492500 | CSCC-44-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-24 | TAON-4018721-1_1 | chr1:150472930-150472988 | + | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.150472941C>T | COSM3473405 | TCGA-EB-A430-01 | [skin][NS][malignant_melanoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-24 | TAON-4018721-1_1 | chr1:150472930-150472988 | + | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.150472100C>A | COSM895523 | TCGA-AP-A059-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-320a | L2HS-606868_3 | chr1:150472076-150472137 | + | ||
| miR-296-3p | 0727A-1107859_1 | chr1:150472073-150472119 | + | ||
| miR-320a | L2HS-606868_3 | chr1:150472076-150472137 | + | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.150472078C>A | COSM4722665 | T3064 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-320a | L2HS-606868_3 | chr1:150472076-150472137 | + | ||
| miR-296-3p | 0727A-1107859_1 | chr1:150472073-150472119 | + | ||
| miR-320a | TA1-958578-1_1 | chr1:150472048-150472097 | + | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.150470890A>T | COSM895513 | TCGA-B5-A11E-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-769-5p | L2HS-3450146_1 | chr1:150470889-150470936 | + | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.150364743G>A | COSM4600172 | UM-SCC-47 | [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| let-7e | L2HS-328078_4 | chr1:150364741-150364786 | + | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.150364742A>G | COSM1600745 | BN43T | [liver][NS][carcinoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| let-7e | L2HS-328078_4 | chr1:150364741-150364786 | + | ||