SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Molecule Type: mRNA
Transcript ID: NM_000980
Gene Symbol: RPL18A
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.17863228C>T COSM438943 TCGA-A2-A0SW-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-106b L2HS-2879422_1 chr19:17863195-17863251 +
miR-503 L2HS-896787_2 chr19:17863182-17863241 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17863225C>A COSM3414051 SS6003306 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-106b L2HS-2879422_1 chr19:17863195-17863251 +
miR-503 L2HS-896787_2 chr19:17863182-17863241 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17863196C>T COSM226383 ME024T [NS][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-106b L2HS-2879422_1 chr19:17863195-17863251 +
miR-503 L2HS-896787_2 chr19:17863182-17863241 +
miR-423-5p L2-1755856_1 chr19:17863174-17863223 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17863187T>C COSM1712034 YUPROST [skin][neck][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-503 L2HS-896787_2 chr19:17863182-17863241 +
miR-423-5p L2-1755856_1 chr19:17863174-17863223 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17863011C>T COSM3371212 TCGA-EL-A4JW-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-1718826_1 chr19:17862969-17863019 +
miR-186 TAON-2229338-1_1 chr19:17862968-17863011 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17863002G>C COSM3959720 J30_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-1718826_1 chr19:17862969-17863019 +
miR-186 TAON-2229338-1_1 chr19:17862968-17863011 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17862996A>T COSM1712033 YUPORCH [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-1718826_1 chr19:17862969-17863019 +
miR-186 TAON-2229338-1_1 chr19:17862968-17863011 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17862988G>A COSM3692257 TCGA-G4-6628-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-1718826_1 chr19:17862969-17863019 +
miR-186 TAON-2229338-1_1 chr19:17862968-17863011 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17862985C>T COSM992941 TCGA-D1-A17Q-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-1718826_1 chr19:17862969-17863019 +
miR-186 TAON-2229338-1_1 chr19:17862968-17863011 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17862201C>A COSM4075517 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-20a TAON-3454298-1_1 chr19:17862148-17862217 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17862179G>A COSM3822315 TCGA-LQ-A4E4-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-20a TAON-3454298-1_1 chr19:17862148-17862217 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17862161G>A COSM1391586 TCGA-CK-5914-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-20a TAON-3454298-1_1 chr19:17862148-17862217 +
miR-421 TAON-1917578-1_1 chr19:17862120-17862169 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17862148G>A COSM125936 HN_62854 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-20a TAON-3454298-1_1 chr19:17862148-17862217 +
miR-421 TAON-1917578-1_1 chr19:17862120-17862169 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17862143G>A COSM1480777 TCGA-C8-A27B-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-421 TAON-1917578-1_1 chr19:17862120-17862169 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17861401C>T COSM182113 TCGA-AA-3949-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-652 TA1-1399951-1_1 chr19:17861379-17861450 +
let-7b L2HS-697356_3 chr19:17861329-17861404 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17861391C>A COSM1304187 TCGA-G2-A3IB-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-652 TA1-1399951-1_1 chr19:17861379-17861450 +
let-7b L2HS-697356_3 chr19:17861329-17861404 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17861366G>A COSM992940 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
let-7c L2-779614_1 chr19:17861341-17861386 +
let-7b L2HS-697356_3 chr19:17861329-17861404 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17861351C>A COSM474346 TCGA-BP-4976-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-744 L1HS-516428_2 chr19:17861319-17861363 +
let-7b L2HS-697356_3 chr19:17861329-17861404 +
let-7c L2-779614_1 chr19:17861341-17861386 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17861347C>A COSM992939 TCGA-B5-A0K6-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-744 L1HS-516428_2 chr19:17861319-17861363 +
let-7c L2-779614_1 chr19:17861341-17861386 +
let-7b L2HS-697356_3 chr19:17861329-17861404 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17861342A>C COSM3891918 TCGA-FS-A4FC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-744 L1HS-516428_2 chr19:17861319-17861363 +
let-7b L2HS-697356_3 chr19:17861329-17861404 +
let-7c L2-779614_1 chr19:17861341-17861386 +

Mutation Mutation ID Sample Name Cancer Type
chr19:g.17861331C>T COSM3530616 TCGA-EE-A180-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
let-7b L2HS-697356_3 chr19:17861329-17861404 +
miR-744 L1HS-516428_2 chr19:17861319-17861363 +



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