SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Molecule Type: | mRNA |
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Transcript ID: | NM_000968 |
Gene Symbol: | RPL4 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66503120G>A | COSM964239 | TCGA-BS-A0UM-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-423-3p | L2-2093374_1 | chr15:66503098-66503142 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66503101G>A | COSM1749286 | B80-5 | [urinary_tract][bladder][carcinoma][transitional_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-423-3p | L2-2093374_1 | chr15:66503098-66503142 | - | ||
miR-1260b | L2HS-3192899_1 | chr15:66503063-66503109 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66503075C>G | COSM555928 | TCGA-55-1596-01 | [lung][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-1260b | L2HS-3192899_1 | chr15:66503063-66503109 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66503073G>T | COSM3956863 | J30_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-1260b | L2HS-3192899_1 | chr15:66503063-66503109 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66502712C>T | COSM434186 | TCGA-AN-A0XT-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-454 | TAON-3570683-1_1 | chr15:66502662-66502721 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66502671G>T | COSM4999863 | PDA_035 | [pancreas][NS][carcinoma][ductal_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-454 | TAON-3570683-1_1 | chr15:66502662-66502721 | - | ||
miR-652 | L1-1224892_1 | chr15:66502642-66502693 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66502667C>T | COSM964238 | TCGA-AP-A0LM-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-454 | TAON-3570683-1_1 | chr15:66502662-66502721 | - | ||
miR-652 | L1-1224892_1 | chr15:66502642-66502693 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66501449G>A | COSM3503336 | TCGA-EE-A29H-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-423-3p | L2-2093345_1 | chr15:66501401-66501449 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66501407A>G | COSM4955648 | BCM739T | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-423-3p | L2-2093345_1 | chr15:66501401-66501449 | - | ||
miR-324-3p | L2HS-655329_3 | chr15:66501392-66501447 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66501405G>A | COSM4441142 | C113 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-423-3p | L2-2093345_1 | chr15:66501401-66501449 | - | ||
miR-324-3p | L2HS-655329_3 | chr15:66501392-66501447 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66501403T>C | COSM4056403 | TCGA-F1-6177-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-324-3p | L2HS-655329_3 | chr15:66501392-66501447 | - | ||
miR-423-3p | L2-2093345_1 | chr15:66501401-66501449 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66501397C>G | COSM416853 | TCGA-BT-A20J-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-324-3p | L2HS-655329_3 | chr15:66501392-66501447 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66500325C>T | COSM3503335 | TCGA-EB-A5UN-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-186 | TA1-2672145-1_1 | chr15:66500293-66500356 | - | ||
miR-330-5p | L2-807031_1 | chr15:66500292-66500351 | - | ||
miR-744 | L2HS-3935510_1 | chr15:66500292-66500330 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66500315C>A | COSM555594 | TCGA-64-5781-01 | [lung][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-186 | TA1-2672145-1_1 | chr15:66500293-66500356 | - | ||
miR-330-5p | L2-807031_1 | chr15:66500292-66500351 | - | ||
miR-744 | L2HS-3935510_1 | chr15:66500292-66500330 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66500173G>A | COSM701435 | TCGA-51-4079-01 | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-744 | L2HS-3935510_1 | chr15:66500157-66500176 | - | ||
miR-330-5p | L2-807031_1 | chr15:66500154-66500176 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66500165A>G | COSM964236 | TCGA-AP-A059-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-744 | L2HS-3935510_1 | chr15:66500157-66500176 | - | ||
miR-330-5p | L2-807031_1 | chr15:66500154-66500176 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66500159G>A | COSM223792 | ME009T | [skin][trunk][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-744 | L2HS-3935510_1 | chr15:66500157-66500176 | - | ||
miR-330-5p | L2-807031_1 | chr15:66500154-66500176 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66499476G>T | COSM1374193 | TCGA-AA-3510-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-1237 | L1-265049_2 | chr15:66499454-66499507 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66499471C>T | COSM470984 | TCGA-BP-5000-01 | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-1237 | L1-265049_2 | chr15:66499454-66499507 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66499458G>T | COSM1374192 | TCGA-AZ-4315-01 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
miR-1237 | L1-265049_2 | chr15:66499454-66499507 | - |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.66499373T>G | COSN5853780 | ||||
miRNA Targets Table | |||||
miR ID | CLASH Sequence ID | Target Site | Strand | ||
let-7a | TA1-4594743-1_1 | chr15:66499365-66499421 | - |