SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Molecule Type: mRNA
Transcript ID: NM_000968
Gene Symbol: RPL4
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr15:g.66503120G>A COSM964239 TCGA-BS-A0UM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-423-3p L2-2093374_1 chr15:66503098-66503142 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66503101G>A COSM1749286 B80-5 [urinary_tract][bladder][carcinoma][transitional_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-423-3p L2-2093374_1 chr15:66503098-66503142 -
miR-1260b L2HS-3192899_1 chr15:66503063-66503109 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66503075C>G COSM555928 TCGA-55-1596-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-1260b L2HS-3192899_1 chr15:66503063-66503109 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66503073G>T COSM3956863 J30_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-1260b L2HS-3192899_1 chr15:66503063-66503109 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66502712C>T COSM434186 TCGA-AN-A0XT-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-454 TAON-3570683-1_1 chr15:66502662-66502721 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66502671G>T COSM4999863 PDA_035 [pancreas][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-454 TAON-3570683-1_1 chr15:66502662-66502721 -
miR-652 L1-1224892_1 chr15:66502642-66502693 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66502667C>T COSM964238 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-454 TAON-3570683-1_1 chr15:66502662-66502721 -
miR-652 L1-1224892_1 chr15:66502642-66502693 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66501449G>A COSM3503336 TCGA-EE-A29H-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-423-3p L2-2093345_1 chr15:66501401-66501449 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66501407A>G COSM4955648 BCM739T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-423-3p L2-2093345_1 chr15:66501401-66501449 -
miR-324-3p L2HS-655329_3 chr15:66501392-66501447 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66501405G>A COSM4441142 C113 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-423-3p L2-2093345_1 chr15:66501401-66501449 -
miR-324-3p L2HS-655329_3 chr15:66501392-66501447 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66501403T>C COSM4056403 TCGA-F1-6177-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-324-3p L2HS-655329_3 chr15:66501392-66501447 -
miR-423-3p L2-2093345_1 chr15:66501401-66501449 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66501397C>G COSM416853 TCGA-BT-A20J-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-324-3p L2HS-655329_3 chr15:66501392-66501447 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66500325C>T COSM3503335 TCGA-EB-A5UN-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-186 TA1-2672145-1_1 chr15:66500293-66500356 -
miR-330-5p L2-807031_1 chr15:66500292-66500351 -
miR-744 L2HS-3935510_1 chr15:66500292-66500330 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66500315C>A COSM555594 TCGA-64-5781-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-186 TA1-2672145-1_1 chr15:66500293-66500356 -
miR-330-5p L2-807031_1 chr15:66500292-66500351 -
miR-744 L2HS-3935510_1 chr15:66500292-66500330 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66500173G>A COSM701435 TCGA-51-4079-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-744 L2HS-3935510_1 chr15:66500157-66500176 -
miR-330-5p L2-807031_1 chr15:66500154-66500176 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66500165A>G COSM964236 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-744 L2HS-3935510_1 chr15:66500157-66500176 -
miR-330-5p L2-807031_1 chr15:66500154-66500176 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66500159G>A COSM223792 ME009T [skin][trunk][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-744 L2HS-3935510_1 chr15:66500157-66500176 -
miR-330-5p L2-807031_1 chr15:66500154-66500176 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66499476G>T COSM1374193 TCGA-AA-3510-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-1237 L1-265049_2 chr15:66499454-66499507 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66499471C>T COSM470984 TCGA-BP-5000-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-1237 L1-265049_2 chr15:66499454-66499507 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66499458G>T COSM1374192 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-1237 L1-265049_2 chr15:66499454-66499507 -

Mutation Mutation ID Sample Name Cancer Type
chr15:g.66499373T>G COSN5853780
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
let-7a TA1-4594743-1_1 chr15:66499365-66499421 -



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