SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Molecule Type: mRNA
Transcript ID: NM_000701
Gene Symbol: ATP1A1
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.116401563C>A COSM894398 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-30d L2HS-1334088_2 chr1:116401553-116401587 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116401560G>C COSM3710027 2T [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-30d L2HS-1334088_2 chr1:116401553-116401587 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116401560G>A COSM894397 TCGA-A5-A0GP-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-30d L2HS-1334088_2 chr1:116401553-116401587 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116401247C>T COSM3862332 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-30d L2HS-1334088_2 chr1:116401225-116401260 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116401225G>T COSM4664270 T3091 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-30d L2HS-1334088_2 chr1:116401225-116401260 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116401183C>T COSM462698 TCGA-CZ-5467-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
let-7b L2HS-1687542_1 chr1:116401160-116401211 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116401180C>T COSM172905 TCGA-AA-3864-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
let-7b L2HS-1687542_1 chr1:116401160-116401211 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116401166C>T COSM3399576 TCGA-32-1977-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
let-7b L2HS-1687542_1 chr1:116401160-116401211 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116401136G>T COSM3360244 TCGA-CJ-4875-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-99a L2HS-3844368_1 chr1:116401129-116401149 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116401129G>C COSM3710026 2T [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-99a L2HS-3844368_1 chr1:116401129-116401149 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116398735G>C COSM527545 TCGA-50-6594-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-93* L1HS-292456_4 chr1:116398695-116398748 +
miR-484 L2-1480173_1 chr1:116398693-116398737 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116398735G>A COSM462697 TCGA-CJ-4638-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-484 L2-1480173_1 chr1:116398693-116398737 +
miR-93* L1HS-292456_4 chr1:116398695-116398748 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116398732G>A COSM1497651 TCGA-73-7498-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-484 L2-1480173_1 chr1:116398693-116398737 +
miR-93* L1HS-292456_4 chr1:116398695-116398748 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116398715A>G COSM3984124 TCGA-MH-A55Z-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-93* L1HS-292456_4 chr1:116398695-116398748 +
miR-484 L2-1480173_1 chr1:116398693-116398737 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116398699G>A COSM4021025 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-93* L1HS-292456_4 chr1:116398695-116398748 +
miR-484 L2-1480173_1 chr1:116398693-116398737 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116393597G>A COSM3801398 TCGA-BH-A0B6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-196a L2HS-307801_5 chr1:116393542-116393597 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116393591G>A COSM378887 TCGA-D5-6930-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-196a L2HS-307801_5 chr1:116393542-116393597 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116393585A>C COSM3801397 TCGA-AN-A046-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-196a L2HS-307801_5 chr1:116393542-116393597 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116393574T>C COSM1172010 ESO06T [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-196a L2HS-307801_5 chr1:116393542-116393597 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116389561C>T COSM4654662 SW1222 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-18a TAON-3475615-1_1 chr1:116389507-116389569 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116389531C>A COSM3671357 TCGA-CH-5739-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-18a TAON-3475615-1_1 chr1:116389507-116389569 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116389528AC>A COSM4664264 T3064 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-18a TAON-3475615-1_1 chr1:116389507-116389569 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116388729G>A COSM2178162 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-197 L2HS-573227_3 chr1:116388675-116388739 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116388702AT>A COSM4747793 pfg413T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-197 L2HS-573227_3 chr1:116388675-116388739 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116387374C>T COSM458679 TCGA-DR-A0ZM-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-320a L2HS-1387139_2 chr1:116387335-116387380 +

Mutation Mutation ID Sample Name Cancer Type
chr1:g.116387348C>A COSM1626334 RK126_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-320a L2HS-1387139_2 chr1:116387335-116387380 +



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