| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Molecule Type: | mRNA |
|---|---|
| Transcript ID: | NM_000199 |
| Gene Symbol: | SGSH |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr17:g.80214643C>T | COSM1225524 | 587316 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-30a* | L2-2393243_1 | chr17:80214614-80214655 | - | ||
| miR-30e* | L2HS-3769843_1 | chr17:80214614-80214655 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr17:g.80214631C>A | COSM3665221 | SS6003133 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-30a* | L2-2393243_1 | chr17:80214614-80214655 | - | ||
| miR-30e* | L2HS-3769843_1 | chr17:80214614-80214655 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr17:g.80214625C>G | COSM437732 | TCGA-A7-A13D-01 | [breast][NS][carcinoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-30a* | L2-2393243_1 | chr17:80214614-80214655 | - | ||
| miR-30e* | L2HS-3769843_1 | chr17:80214614-80214655 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr17:g.80214622G>A | COSM2803359 | DLD1 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-30a* | L2-2393243_1 | chr17:80214614-80214655 | - | ||
| miR-30e* | L2HS-3769843_1 | chr17:80214614-80214655 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr17:g.80214615G>A | COSM4725493 | T1204 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-30a* | L2-2393243_1 | chr17:80214614-80214655 | - | ||
| miR-30e* | L2HS-3769843_1 | chr17:80214614-80214655 | - | ||
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr17:g.80212157C>T | COSM708745 | TCGA-37-5819-01 | [lung][NS][carcinoma][squamous_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | CLASH Sequence ID | Target Site | Strand | ||
| miR-941 | L2-1825178_1 | chr17:80212127-80212171 | - | ||