| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_001135590 |
|---|---|
| Gene Symbol: | ZNF577 |
| Description: | Homo sapiens zinc finger protein 577 (ZNF577), transcript variant 2, mRNA. |
| Gene Location: | chr19(-):52374550-52391189 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr19:g.51871386T>C | ICGC_8ECA4076-2A78-11E2-96E7-04FD496BB9B8 | CPCG_0102_Pr_P_P1 | ProstateCancer(OICR,CA) | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-204-3p |
cctgtaaTCCCAGCacttt |
0 | GCUGGGAA | m7a | Created | -0.152 | -0.152 | No effect |
| hsa-miR-4663 |
cctgtaatCTCAGCacttt |
0 | AGCUGAGC | m6b | Disrupted | -0.136 | no TS |
0.65 |
| hsa-miR-5089 |
cctgtAATCCCAgcacttt |
0 | GUGGGAUU | m7b | Created | no TS | -0.104 | No effect |
| hsa-miR-5186 |
cctgtAATCTCagcacttt |
0 | AGAGAUUG | m6b | Disrupted | -0.027 | no TS | No effect |
| hsa-miR-5589-5p |
cctgtaatCCCAGCacttt |
0 | GGCUGGGU | m6b | Created | no TS | -0.173 |
-0.35 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr19:g.51871614G>C | COSN8552999 | tumor_4163639 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3662 |
gtatgttaaCATTTTattc |
0 | GAAAAUGA | m6b | Created | no TS | 0.027000 | No effect |
| hsa-miR-4668-3p |
gtatgttaaGATTTTattc |
1 |
GAAAAUCC | m6b | Disrupted | -0.003000 | no TS |
-0.190000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr19:g.51872470A>T | COSN8606234 | 1255_T | [lung][NS][carcinoma][squamous_cell_carcinoma] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1266 |
ttatatCCCTGAGagctca |
0 | CCUCAGGG | m7b | Created | no TS | -0.443000 |
-0.110000 |
| hsa-miR-204-3p |
ttataTCCCAGagagctca |
1 |
GCUGGGAA | m6b | Disrupted | -0.152000 | no TS | No effect |
| hsa-miR-211-3p |
ttataTCCCTGagagctca |
0 | GCAGGGAC | m6b | Created | no TS | -0.161000 |
0.610000 |
| hsa-miR-3191-5p |
ttatatcCCAGAGAGctca |
1 |
CUCUCUGG | m8a | Disrupted | -0.286000 | -0.124000 | No effect |
| hsa-miR-326 |
ttatatCCCAGAGagctca |
1 |
CCUCUGGG | m7b | Disrupted | -0.423000 | no TS |
-1.200000 |
| hsa-miR-330-5p |
ttatatCCCAGAGAgctca |
1 |
UCUCUGGG | m8a | Disrupted | -0.433000 | no TS |
-1.150000 |
| hsa-miR-4314 |
ttataTCCCAGAGagctca |
1 |
CUCUGGGA | m8a | Disrupted | -0.249000 | no TS | No effect |
| hsa-miR-4441 |
ttataTCCCTGagagctca |
0 | ACAGGGAG | m6b | Created | no TS | -0.148000 | No effect |
| hsa-miR-4518 |
ttatatCCCTGAGagctca |
0 | GCUCAGGG | m7b | Created | no TS | -0.475000 |
-6.320000 |
| hsa-miR-4646-5p |
ttataTCCCAGagagctca |
1 |
ACUGGGAA | m6b | Disrupted | -0.162000 | no TS |
1.580000 |
| hsa-miR-769-3p |
ttatATCCCAGagagctca |
0 | CUGGGAUC | m7a | Disrupted | NA | NA |
-2.400000 |