SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_001109809
Gene Symbol: ZFP57
Description: Homo sapiens zinc finger protein 57 homolog (mouse) (ZFP57), mRNA.
Gene Location: chr6(-):29640168-29644931
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.29672408C>A COSN5810911 EOPC-03_tumor [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-5092 agacaggtgCGTGGATaag
1
AAUCCACG m7b (m7b->m6b) -0.383000 -0.148000 4.680000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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