SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_015642
Gene Symbol: ZBTB20
Description: Homo sapiens zinc finger and BTB domain containing 20 (ZBTB20), transcript variant 1, mRNA.
Gene Location: chr3(-):114056946-114866127
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr3:g.114338980G>A COSN7553330 8062296 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1206 ctttcttATGAACAaaaca
UGUUCAUG m7a Disrupted -0.127000 no TS 0.650000
hsa-miR-375 ctttcttatGAACAAAaca
UUUGUUCG m7a (m7a->m6a) -0.122000 no TS 1.520000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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