| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_003401 |
|---|---|
| Gene Symbol: | XRCC4 |
| Description: | Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 4 (XRCC4), transcript variant 1, mRNA. |
| Gene Location: | chr5(+):82373316-82649579 |
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| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr5:g.83353552T>A | COSN6928832 | RK178_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-4520a-3p |
tgatagCTGTCCAAcatcc |
0 | UUGGACAG | m8a | Disrupted | -0.374000 | no TS |
0.640000 |
| hsa-miR-4520b-3p |
tgatagcTGTCCAAcatcc |
0 | UUUGGACA | m7b | Disrupted | -0.172000 | no TS |
2.710000 |
| hsa-miR-5587-5p |
tgatagcTGACCAacatcc |
0 | AUGGUCAC | m6b | Created | no TS | -0.132000 |
0.081000 |