| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_005432 |
|---|---|
| Gene Symbol: | XRCC3 |
| Description: | Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 3 (XRCC3), transcript variant 3, mRNA. |
| Gene Location: | chr14(-):104163953-104181823 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr14:g.103697862G>C | COSN1164637 | HX14T | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1184 |
tcccacactCTGCAGaccc |
2 |
CCUGCAGC | m6b | Created | -0.029000 | -0.072000 | No effect |
| hsa-miR-128 |
tcccaCACTGTGcagaccc |
1 |
UCACAGUG | m7b | Disrupted | -0.202000 | -0.123000 |
-0.660000 |
| hsa-miR-17-3p |
tcccacactCTGCAGaccc |
0 | ACUGCAGU | m6b | Created | no TS | -0.050000 |
-0.390000 |
| hsa-miR-2467-3p |
tcccacaCTCTGCagaccc |
0 | AGCAGAGG | m6b | Created | no TS | -0.058000 | No effect |
| hsa-miR-3130-3p |
tcccacactGTGCAGaccc |
0 | GCUGCACC | m6b | Disrupted | -0.096000 | no TS | No effect |
| hsa-miR-3158-5p |
tcccacacTCTGCAGaccc |
0 | CCUGCAGA | m7b | Created | no TS | -0.188000 |
-1.520000 |
| hsa-miR-3678-3p |
tcccacaCTCTGCAGaccc |
0 | CUGCAGAG | m8a | Created | no TS | -0.112000 |
-5.930000 |
| hsa-miR-3681-3p |
tcccaCACTGTGcagaccc |
1 |
ACACAGUG | m7b | Disrupted | -0.147000 | -0.077000 | No effect |
| hsa-miR-4302 |
tccCACACTGtgcagaccc |
1 |
CCAGUGUG | m7b | (m7b->m6c) | -0.143000 | -0.089000 |
-0.010000 |
| hsa-miR-574-5p |
tccCACACTCtgcagaccc |
0 | UGAGUGUG | m7b | (m6c->m7b) | no TS | -0.078000 | No effect |
| hsa-miR-759 |
tcccaCACTCTGCagaccc |
0 | GCAGAGUG | m8a | Created | no TS | -0.085000 |
7.830000 |
| hsa-miR-1184 |
tcccacactCTGCAGaccc |
0 | CCUGCAGC | m6b | Created | -0.029 | -0.072 | No effect |
| hsa-miR-128 |
tcccaCACTGTGcagaccc |
0 | UCACAGUG | m7b | Disrupted | -0.202 | -0.123 |
-0.66 |
| hsa-miR-17-3p |
tcccacactCTGCAGaccc |
0 | ACUGCAGU | m6b | Created | no TS | -0.05 |
-0.39 |
| hsa-miR-2467-3p |
tcccacaCTCTGCagaccc |
0 | AGCAGAGG | m6b | Created | no TS | -0.058 | No effect |
| hsa-miR-3130-3p |
tcccacactGTGCAGaccc |
0 | GCUGCACC | m6b | Disrupted | -0.096 | no TS | No effect |
| hsa-miR-3158-5p |
tcccacacTCTGCAGaccc |
0 | CCUGCAGA | m7b | Created | no TS | -0.188 |
-1.52 |
| hsa-miR-3678-3p |
tcccacaCTCTGCAGaccc |
0 | CUGCAGAG | m8a | Created | no TS | -0.112 |
-5.93 |
| hsa-miR-3681-3p |
tcccaCACTGTGcagaccc |
0 | ACACAGUG | m7b | Disrupted | -0.147 | -0.077 | No effect |
| hsa-miR-4302 |
tccCACACTGtgcagaccc |
0 | CCAGUGUG | m7b | (m7b->m6c) | -0.143 | -0.089 |
-0.01 |
| hsa-miR-574-5p |
tccCACACTCtgcagaccc |
0 | UGAGUGUG | m7b | (m6c->m7b) | no TS | -0.078 | No effect |
| hsa-miR-759 |
tcccaCACTCTGCagaccc |
0 | GCAGAGUG | m8a | Created | no TS | -0.085 |
7.83 |