SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_015626
Gene Symbol: WSB1
Description: Homo sapiens WD repeat and SOCS box containing 1 (WSB1), transcript variant 1, mRNA.
Gene Location: chr17(+):25621105-25640645
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.27312582G>C COSN1194769 HCC92T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-302b-5p ttttTTAAAGatctaactg
 2
 ACUUUAAC m6b Disrupted -0.086000 -0.056000 2.520000
hsa-miR-302d-5p ttttTTAAAGatctaactg
 2
 ACUUUAAC m6b Disrupted -0.080000 -0.053000 0.400000
hsa-miR-576-3p ttttttaaACATCTaactg
 0 AAGAUGUG m6b Created no TS -0.155000 -12.120000
hsa-miR-302b-5p ttttTTAAAGatctaactg
 2
 ACUUUAAC m6b Disrupted -0.086000 -0.056000 2.520000
hsa-miR-302d-5p ttttTTAAAGatctaactg
 2
 ACUUUAAC m6b Disrupted -0.080000 -0.053000 0.400000
hsa-miR-576-3p ttttttaaACATCTaactg
 0 AAGAUGUG m6b Created no TS -0.155000 -12.120000
hsa-miR-302b-5p ttttTTAAAGatctaactg
 2
 ACUUUAAC m6b Disrupted -0.086 -0.056 2.52
hsa-miR-302d-5p ttttTTAAAGatctaactg
 2
 ACUUUAAC m6b Disrupted -0.08 -0.053 0.4
hsa-miR-576-3p ttttttaaACATCTaactg
 0 AAGAUGUG m6b Created no TS -0.155 -12.12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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